RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 ID2Q02363 134 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 DDX39BQ13838 428 aaKnown RBP18.3■□□□□ 0.52
SREBF1-216ENST00000490796 OPN5Q6U736 354 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 RTL4Q6ZR62 310 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 OR2M7Q8NG81 312 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 SLC2A12Q8TD20 617 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 ZNF473Q8WTR7 871 aaKnown RBP18.3■□□□□ 0.52
SREBF1-216ENST00000490796 RND1Q92730 232 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 DGAT2Q96PD7 388 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 RAB17Q9H0T7 212 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 ITGB1BP2Q9UKP3 347 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 ZNF407Q9C0G0 2248 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 SYCE1LA8MT33 242 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 SAP18O00422 153 aaKnown RBP18.29■□□□□ 0.52
SREBF1-216ENST00000490796 KERAO60938 352 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 LTA4HP09960 611 aaKnown RBP18.29■□□□□ 0.52
SREBF1-216ENST00000490796 EPB42P16452 691 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 TLX1P31314 330 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-216ENST00000490796 CASP2P42575 452 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 RNF4P78317 190 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 C2orf54Q08AI8 447 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 ZNF750Q32MQ0 723 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 KBTBD12Q3ZCT8 623 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 NDUFAF5Q5TEU4 345 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 ZNF793Q6ZN11 406 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 CMC1Q7Z7K0 106 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 ZNF295-AS1Q8N0V1 137 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 OR8K3Q8NH51 312 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 SGCZQ96LD1 299 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 FAM173AQ9BQD7 235 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 DEPPQ9NTK1 212 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 ADGRE2Q9UHX3 823 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 PYCARDQ9ULZ3 195 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 DNAJC13O75165 2243 aa18.29■□□□□ 0.52
SREBF1-216ENST00000490796 TMEM200CA6NKL6 621 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 NPIPA2E9PIF3 369 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 NPIPA3F8WFD2 350 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 G3V3Y1 287 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 UBXN8O00124 270 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 FANCGO15287 622 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 FAM155BO75949 473 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 P04436 131 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 EPORP19235 508 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 CNR1P21554 472 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 MAGEA4P43358 317 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 GPX6P59796 221 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 PHEXP78562 749 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 NAB1Q13506 487 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 KHDRBS2Q5VWX1 349 aaKnown RBP18.28■□□□□ 0.52
SREBF1-216ENST00000490796 FAM47EQ6ZV65 393 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 UBE3DQ7Z6J8 389 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 ISCA2Q86U28 154 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 LAS2Q8IYD9 372 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 ZNF321PQ8N8H1 164 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 OR7G3Q8NG95 312 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 OR5M3Q8NGP4 307 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 FBF1Q8TES7 1133 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 RGMAQ96B86 450 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 RBM18Q96H35 190 aaKnown RBP18.28■□□□□ 0.52
SREBF1-216ENST00000490796 TTTY12Q9BZ98 90 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 OR51B5Q9H339 312 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 PLSCR2Q9NRY7 297 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 SACM1LQ9NTJ5 587 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 MS4A12Q9NXJ0 267 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 GRHL1Q9NZI5 618 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 ACOT9Q9Y305 439 aa18.28■□□□□ 0.52
SREBF1-216ENST00000490796 FAM90A27PA6NNH2 459 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 SLC35E2BP0CK96 405 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 CAPN3P20807 821 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 CHRNB4P30926 498 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 CASQ1P31415 396 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 TLE4Q04727 773 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 SLAMF1Q13291 335 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 BIKQ13323 160 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 DEPDC1Q5TB30 811 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 OR4C11Q6IEV9 310 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 ACAD11Q709F0 780 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 OR4N5Q8IXE1 308 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 TEX9Q8N6V9 391 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 GOLM1Q8NBJ4 401 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 SLC22A8Q8TCC7 542 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 C14orf79Q96F83 325 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 SCYL1Q96KG9 808 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 ART5Q96L15 291 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 RPF2Q9H7B2 306 aaKnown RBP18.27■□□□□ 0.52
SREBF1-216ENST00000490796 KCNJ16Q9NPI9 418 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.27■□□□□ 0.52
SREBF1-216ENST00000490796 PHF11Q9UIL8 331 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 FBN2P35556 2912 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 OTOGQ6ZRI0 2925 aa18.27■□□□□ 0.52
SREBF1-216ENST00000490796 TACC2O95359 2948 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 F8P00451 2351 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 PINLYPA6NC86 204 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 SCELO95171 688 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 GFAPP14136 432 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 GMPRP36959 345 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 STT3AP46977 705 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 PLIN5Q00G26 463 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 PMPCAQ10713 525 aa18.26■□□□□ 0.51
SREBF1-216ENST00000490796 FAM83EQ2M2I3 478 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms