RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TNNI3P19429 210 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 PTX3P26022 381 aaPredicted RBP29.19■■■□□ 2.26
LDB1-204ENST00000490751 COL8A1P27658 744 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 ARL1P40616 181 aaPredicted RBP29.19■■■□□ 2.26
LDB1-204ENST00000490751 ZRSR2Q15696 482 aaKnown RBP29.19■■■□□ 2.26
LDB1-204ENST00000490751 IFT20Q8IY31 132 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 CYP4Z2PQ8N1L4 340 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 ZCCHC7Q8N3Z6 543 aaKnown RBP29.19■■■□□ 2.26
LDB1-204ENST00000490751 MORN4Q8NDC4 146 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 OR52B6Q8NGF0 335 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 ATP6V1E2Q96A05 226 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 CDK15Q96Q40 435 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 OR8D2Q9GZM6 311 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 MS4A12Q9NXJ0 267 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 C17orf105B2RV13 164 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 NPIPA5E9PKD4 350 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 FGF17O60258 216 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 ARFIP1P53367 373 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 C16orf47Q6ZP98 133 aaPredicted RBP29.18■■■□□ 2.26
LDB1-204ENST00000490751 CPSF7Q8N684 471 aaKnown RBP29.18■■■□□ 2.26
LDB1-204ENST00000490751 WDR20Q8TBZ3 569 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 LIN28AQ9H9Z2 209 aaKnown RBP29.18■■■□□ 2.26
LDB1-204ENST00000490751 PHF11Q9UIL8 331 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 PCTPQ9UKL6 214 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 NPIPA1Q9UND3 350 aa29.18■■■□□ 2.26
LDB1-204ENST00000490751 YARS2Q9Y2Z4 477 aaKnown RBP29.18■■■□□ 2.26
LDB1-204ENST00000490751 TMEM200CA6NKL6 621 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 ETHE1O95571 254 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 ABHD2P08910 425 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 SNRPAP09012 282 aaKnown RBP29.17■■■□□ 2.26
LDB1-204ENST00000490751 SSR4P51571 173 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 NEK2P51955 445 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 CCNG1P51959 295 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 HNRNPH2P55795 449 aaKnown RBP29.17■■■□□ 2.26
LDB1-204ENST00000490751 TNFRSF17Q02223 184 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 ZNF800Q2TB10 664 aaPredicted RBP eCLIP29.17■■■□□ 2.262e-11■□□□□ 9.6
LDB1-204ENST00000490751 HSDL2Q6YN16 418 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 GPR180Q86V85 440 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 OR4N5Q8IXE1 308 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 ZNF321PQ8N8H1 164 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 SREK1Q8WXA9 508 aaKnown RBP29.17■■■□□ 2.26
LDB1-204ENST00000490751 NSUN5Q96P11 429 aaKnown RBP29.17■■■□□ 2.26
LDB1-204ENST00000490751 ZNF717Q9BY31 904 aaPredicted RBP29.17■■■□□ 2.26
LDB1-204ENST00000490751 RPF2Q9H7B2 306 aaKnown RBP29.17■■■□□ 2.26
LDB1-204ENST00000490751 KLF13Q9Y2Y9 288 aaPredicted RBP29.17■■■□□ 2.26
LDB1-204ENST00000490751 ATG4BQ9Y4P1 393 aa29.17■■■□□ 2.26
LDB1-204ENST00000490751 CA7P43166 264 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 CUL3Q13618 768 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 KRTCAP3Q53RY4 240 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 C18orf63Q68DL7 685 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 MYO7BQ6PIF6 2116 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 SIAH3Q8IW03 269 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 SLC2A12Q8TD20 617 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 MRPL57Q9BQC6 102 aaKnown RBP29.16■■■□□ 2.26
LDB1-204ENST00000490751 MRPL46Q9H2W6 279 aaKnown RBP29.16■■■□□ 2.26
LDB1-204ENST00000490751 ZBTB26Q9HCK0 441 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 SH3BGRL2Q9UJC5 107 aa29.16■■■□□ 2.26
LDB1-204ENST00000490751 SLC19A2O60779 497 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 EEDO75530 441 aaKnown RBP29.15■■■□□ 2.26
LDB1-204ENST00000490751 OR2J2O76002 312 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 ZNF24P17028 368 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 BSGP35613 385 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 IGLV3-21P80748 117 aaPredicted RBP29.15■■■□□ 2.26
LDB1-204ENST00000490751 TRMT10CQ7L0Y3 403 aaKnown RBP29.15■■■□□ 2.26
LDB1-204ENST00000490751 C7orf57Q8NEG2 295 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 TRIM44Q96DX7 344 aaPredicted RBP29.15■■■□□ 2.26
LDB1-204ENST00000490751 NTMT1Q9BV86 223 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 PSD3Q9NYI0 1048 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 MYOTQ9UBF9 498 aa29.15■■■□□ 2.26
LDB1-204ENST00000490751 FOXE1O00358 373 aaPredicted RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 RIPK2O43353 540 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 PRKRAO75569 313 aaKnown RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 RHOXF2BP0C7M4 288 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 GCAP28676 217 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 TLX1P31314 330 aaPredicted RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 BUD31P41223 144 aaPredicted RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 STT3AP46977 705 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 MEOX1P50221 254 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 TRAF3Q13114 568 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 RNFT1Q5M7Z0 435 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 LGSNQ5TDP6 509 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 MRM1Q6IN84 353 aaKnown RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 MDGA2Q7Z553 956 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 TANKQ92844 425 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 MTFMTQ96DP5 389 aaKnown RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 MAGED4Q96JG8 741 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 DGAT2Q96PD7 388 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 RHOXF2Q9BQY4 288 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 LYARQ9NX58 379 aaKnown RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 SUCOQ9UBS9 1254 aaKnown RBP29.14■■■□□ 2.26
LDB1-204ENST00000490751 ERVK-11Q9UQG0 969 aa29.14■■■□□ 2.26
LDB1-204ENST00000490751 A0A0A6YYD5 115 aa29.13■■■□□ 2.25
LDB1-204ENST00000490751 WWP2O00308 870 aa29.13■■■□□ 2.25
LDB1-204ENST00000490751 CCL21O00585 134 aa29.13■■■□□ 2.25
LDB1-204ENST00000490751 TMPRSS11DO60235 418 aa29.13■■■□□ 2.25
LDB1-204ENST00000490751 RPS17P08708 135 aaKnown RBP29.13■■■□□ 2.25
LDB1-204ENST00000490751 COX7A2P14406 83 aa29.13■■■□□ 2.25
LDB1-204ENST00000490751 HK2P52789 917 aa29.13■■■□□ 2.25
LDB1-204ENST00000490751 FOLH1Q04609 750 aa29.13■■■□□ 2.25
LDB1-204ENST00000490751 CYP20A1Q6UW02 462 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms