RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MST1P26927 711 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 IFT88Q13099 833 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 TEX35Q5T0J7 233 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 HSDL2Q6YN16 418 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 MAMDC2Q7Z304 686 aaPredicted RBP16.26■□□□□ 0.19
SEC13-218ENST00000490283 LCA5Q86VQ0 697 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 NUDT13Q86X67 352 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 CYP4Z2PQ8N1L4 340 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 RNF175Q8N4F7 328 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 TANKQ92844 425 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 SERPINI1Q99574 410 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 NTMT1Q9BV86 223 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 SORBS1Q9BX66 1292 aaKnown RBP16.26■□□□□ 0.19
SEC13-218ENST00000490283 OR8D2Q9GZM6 311 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 RPF2Q9H7B2 306 aaKnown RBP16.26■□□□□ 0.19
SEC13-218ENST00000490283 TRIM45Q9H8W5 580 aaPredicted RBP16.26■□□□□ 0.19
SEC13-218ENST00000490283 PSD3Q9NYI0 1048 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 SUCOQ9UBS9 1254 aaKnown RBP16.26■□□□□ 0.19
SEC13-218ENST00000490283 ERVK-11Q9UQG0 969 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 YARS2Q9Y2Z4 477 aaKnown RBP16.26■□□□□ 0.19
SEC13-218ENST00000490283 CLDN16Q9Y5I7 305 aa16.26■□□□□ 0.19
SEC13-218ENST00000490283 USP9YO00507 2555 aaPredicted RBP16.25■□□□□ 0.19
SEC13-218ENST00000490283 TRGV8A0A0C4DH27 118 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 MYOCOSA0A1B0GUC4 107 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ASPDHA6ND91 283 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 WIPF3A6NGB9 483 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 OR7A17O14581 309 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 OTCP00480 354 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 RNF224P0DH78 156 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ZNF24P17028 368 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 PLIN5Q00G26 463 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 TNFRSF17Q02223 184 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ID2Q02363 134 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 KRTCAP3Q53RY4 240 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ZNF468Q5VIY5 522 aaPredicted RBP16.25■□□□□ 0.19
SEC13-218ENST00000490283 C1QL3Q5VWW1 255 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 FRG2Q64ET8 278 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ADGRD1Q6QNK2 874 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 TIFABQ6ZNK6 161 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 MILR1Q7Z6M3 343 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.25■□□□□ 0.19
SEC13-218ENST00000490283 FJX1Q86VR8 437 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 GPALPP1Q8IXQ4 340 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 OR52B6Q8NGF0 335 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 OR5L2Q8NGL0 311 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 WDR20Q8TBZ3 569 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ASB15Q8WXK1 588 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 RBM18Q96H35 190 aaKnown RBP16.25■□□□□ 0.19
SEC13-218ENST00000490283 MAGED4Q96JG8 741 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ART5Q96L15 291 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 FRMD6Q96NE9 622 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 CDK15Q96Q40 435 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 FRG2BQ96QU4 278 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 PELOQ9BRX2 385 aaKnown RBP16.25■□□□□ 0.19
SEC13-218ENST00000490283 ELOVL6Q9H5J4 265 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 SEMA4BQ9NPR2 832 aaPredicted RBP16.25■□□□□ 0.19
SEC13-218ENST00000490283 AHSPQ9NZD4 102 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 PPT2Q9UMR5 302 aa16.25■□□□□ 0.19
SEC13-218ENST00000490283 ARHGAP10A1A4S6 786 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 A8MVJ9 347 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 KLRC4-KLRK1H3BQV0 150 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 SEMA3DO95025 777 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 STT3AP46977 705 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 GPR143P51810 404 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 NEK2P51955 445 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 SRSF11Q05519 484 aaKnown RBP16.24■□□□□ 0.19
SEC13-218ENST00000490283 MTFR2Q6P444 385 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 PAGE2Q7Z2X7 111 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 POGLUT1Q8NBL1 392 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 OR8K3Q8NH51 312 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 SLC2A12Q8TD20 617 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 PTPMT1Q8WUK0 201 aaPredicted RBP16.24■□□□□ 0.19
SEC13-218ENST00000490283 MTFMTQ96DP5 389 aaKnown RBP16.24■□□□□ 0.19
SEC13-218ENST00000490283 DDX31Q9H8H2 851 aaKnown RBP16.24■□□□□ 0.19
SEC13-218ENST00000490283 TIMMDC1Q9NPL8 285 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEC13-218ENST00000490283 HPF1Q9NWY4 346 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 PSMC3IPQ9P2W1 217 aaPredicted RBP16.24■□□□□ 0.19
SEC13-218ENST00000490283 FETUBQ9UGM5 382 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 ZNF223Q9UK11 482 aaPredicted RBP16.24■□□□□ 0.19
SEC13-218ENST00000490283 SPTAN1Q13813 2472 aaKnown RBP16.24■□□□□ 0.19
SEC13-218ENST00000490283 POLEQ07864 2286 aa16.24■□□□□ 0.19
SEC13-218ENST00000490283 HIVEP3Q5T1R4 2406 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 A8MT66 165 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 NPIPA5E9PKD4 350 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 FGF17O60258 216 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 RPS17P08708 135 aaKnown RBP16.23■□□□□ 0.19
SEC13-218ENST00000490283 FAM58BPP0C7Q3 252 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 NR2F6P10588 404 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 HNRNPH2P55795 449 aaKnown RBP16.23■□□□□ 0.19
SEC13-218ENST00000490283 FOLH1Q04609 750 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 TRAF3Q13114 568 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 SLC29A2Q14542 456 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 GGTA1PQ4G0N0 100 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 OR4N5Q8IXE1 308 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 OR4F6Q8NGB9 312 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 ACMSDQ8TDX5 336 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 RELTQ969Z4 430 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 ANKRD9Q96BM1 317 aaPredicted RBP16.23■□□□□ 0.19
SEC13-218ENST00000490283 GPR137Q96N19 417 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms