RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 LRATO95237 230 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 NTRK1P04629 796 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 PGRP06401 933 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 FHP07954 510 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
TRAIP-210ENST00000489948 CAPN3P20807 821 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 AGXTP21549 392 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 XCR1P46094 333 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 OR1D4P47884 311 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 HNRNPFP52597 415 aaKnown RBP12.59□□□□□ -0.39
TRAIP-210ENST00000489948 NME5P56597 212 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 GABREP78334 506 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 MC1RQ01726 317 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAIP-210ENST00000489948 FAM174BQ3ZCQ3 159 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 SPANXN4Q5MJ08 99 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 CPTPQ5TA50 214 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 C18orf63Q68DL7 685 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 QSOX2Q6ZRP7 698 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 GK5Q6ZS86 529 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 ZC3H7AQ8IWR0 971 aaKnown RBP12.59□□□□□ -0.39
TRAIP-210ENST00000489948 METTL27Q8N6F8 245 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-210ENST00000489948 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 C7orf57Q8NEG2 295 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 PPCDCQ96CD2 204 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 NRSN2Q9GZP1 204 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 RPF2Q9H7B2 306 aaKnown RBP12.59□□□□□ -0.39
TRAIP-210ENST00000489948 WDR54Q9H977 334 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 LANCL2Q9NS86 450 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 SLC22A11Q9NSA0 550 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 ZNF282Q9UDV7 671 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-210ENST00000489948 MMACHCQ9Y4U1 282 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 FREM2Q5SZK8 3169 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 ASPMQ8IZT6 3477 aa12.58□□□□□ -0.39
TRAIP-210ENST00000489948 A0A1W2PP18 115 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 DCDC2BA2VCK2 349 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 VSTM2BA6NLU5 285 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 AGRPO00253 132 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 NR5A2O00482 541 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 EBAG9O00559 213 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 RNASET2O00584 256 aaKnown RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 AKAP10O43572 662 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 BMP10O95393 424 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 KLK3P07288 261 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 IFI6P09912 130 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 COX4I1P13073 169 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 HSD17B7P56937 341 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 IGLV3-21P80748 117 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 ACTN3Q08043 901 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 RTP5Q14D33 572 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 MLC1Q15049 377 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 TIGD2Q4W5G0 525 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 ZNF385BQ569K4 471 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 ANXA8L1Q5VT79 327 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 C1orf189Q5VU69 101 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 CPZQ66K79 652 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 MRPL14Q6P1L8 145 aaKnown RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 FAM198BQ6UWH4 519 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 OVCH1Q7RTY7 1134 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 TICAM1Q8IUC6 712 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 SCUBE1Q8IWY4 988 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 MMP21Q8N119 569 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 OR7A2PQ8NGA2 310 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 GFM2Q969S9 779 aaKnown RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 PEX11GQ96HA9 241 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 SLC45A3Q96JT2 553 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 SLC46A1Q96NT5 459 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 DUSP26Q9BV47 211 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 SLC35C2Q9NQQ7 365 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 ACSS1Q9NUB1 689 aaPredicted RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 FOXJ2Q9P0K8 574 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 TRPC4Q9UBN4 977 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 TAGLN3Q9UI15 199 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 NXT1Q9UKK6 140 aaKnown RBP12.58□□□□□ -0.4
TRAIP-210ENST00000489948 UTS2RQ9UKP6 389 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 PSME2Q9UL46 239 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 MAN2B2Q9Y2E5 1009 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 MAU2Q9Y6X3 613 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 AHCTF1Q8WYP5 2266 aa12.58□□□□□ -0.4
TRAIP-210ENST00000489948 CROCCQ5TZA2 2017 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 FAM149AA5PLN7 773 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 ASPDHA6ND91 283 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 CCDC154A6NI56 674 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 PDPK1O15530 556 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 SCN2BO60939 215 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 PRKRAO75569 313 aaKnown RBP12.57□□□□□ -0.4
TRAIP-210ENST00000489948 TNFSF15O95150 251 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 CD63P08962 238 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 LAMP1P11279 417 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 CALB2P22676 271 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 S100A3P33764 101 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 ALDH9A1P49189 494 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 WNT3P56703 355 aa12.57□□□□□ -0.4
TRAIP-210ENST00000489948 PCBP4P57723 403 aaKnown RBP12.57□□□□□ -0.4
TRAIP-210ENST00000489948 STX5Q13190 355 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms