RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 TUSC5Q8IXB3 177 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 KIAA1524Q8TCG1 905 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 AGAP11Q8TF27 550 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 PANX3Q96QZ0 392 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 SH3GLB2Q9NR46 395 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 MIS18AQ9NYP9 233 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 DHRS4-AS1Q9P1J3 65 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 FBXL5Q9UKA1 691 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 OR1A2Q9Y585 309 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 A8MU10 97 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 E9PAM4 449 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 GLRA1P23415 457 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 SPRP35270 261 aaPredicted RBP3.9□□□□□ -1.79
CCDC39-206ENST00000489868 MATKP42679 507 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 RGS19P49795 217 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 RPL27P61353 136 aaKnown RBP3.9□□□□□ -1.79
CCDC39-206ENST00000489868 ROR1Q01973 937 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 ZNF491Q8N8L2 437 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 CLEC1AQ8NC01 280 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 RHOXF1Q8NHV9 184 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 SPATA18Q8TC71 538 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 PCED1BQ96HM7 432 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 ANKRD27Q96NW4 1050 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 ADPGKQ9BRR6 497 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 UTP14AQ9BVJ6 771 aaKnown RBP3.9□□□□□ -1.79
CCDC39-206ENST00000489868 TRIM7Q9C029 511 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 ZNF350Q9GZX5 532 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 DNAJC17Q9NVM6 304 aaKnown RBP3.9□□□□□ -1.79
CCDC39-206ENST00000489868 MGAT4AQ9UM21 535 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 CPQQ9Y646 472 aa3.9□□□□□ -1.79
CCDC39-206ENST00000489868 A0A0A6YYC8 382 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-206ENST00000489868 IGKV6D-41A0A0C4DH26 115 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 NEDD8-MDP1E9PL57 170 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 I3L1I5 382 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CHUKO15111 745 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 TTI1O43156 1089 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 THY1P04216 161 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CCDC159P0C7I6 412 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 OR9G9P0C7N8 305 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 C8orf89P0DMQ9 161 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 EZRP15311 586 aaKnown RBP3.89□□□□□ -1.79
CCDC39-206ENST00000489868 AZU1P20160 251 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 GPX3P22352 226 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CCR4P51679 360 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 ADARP55265 1226 aaKnown RBP3.89□□□□□ -1.79
CCDC39-206ENST00000489868 SLC17A1Q14916 467 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 SPHARQ15513 63 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 ACKR1Q16570 336 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 Q1RN00 199 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 TYSND1Q2T9J0 566 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 HECTD3Q5T447 861 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CYP4V2Q6ZWL3 525 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CD177Q8N6Q3 437 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CCDC197Q8NCU1 140 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 TEKT1Q969V4 418 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 NTNG2Q96CW9 530 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CDKN2AIPNLQ96HQ2 116 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 CDHR1Q96JP9 859 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 NUSAP1Q9BXS6 441 aaKnown RBP3.89□□□□□ -1.79
CCDC39-206ENST00000489868 LRRC2Q9BYS8 371 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 NT5DC2Q9H857 520 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 TMEM161AQ9NX61 479 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 PLEK2Q9NYT0 353 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 ARMCX1Q9P291 453 aa3.89□□□□□ -1.79
CCDC39-206ENST00000489868 MRPL11Q9Y3B7 192 aaKnown RBP3.89□□□□□ -1.79
CCDC39-206ENST00000489868 BCLAF3A2AJT9 711 aaKnown RBP3.88□□□□□ -1.79
CCDC39-206ENST00000489868 TRIM49BA6NDI0 452 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 FOXI3A8MTJ6 420 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-206ENST00000489868 TMCO5BA8MYB1 307 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 SLC7A4O43246 635 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 CSDE1O75534 798 aaKnown RBP3.88□□□□□ -1.79
CCDC39-206ENST00000489868 RAD51DO75771 328 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 ST8SIA6P61647 398 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 NFE2L1Q14494 772 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 DCAF12Q5T6F0 453 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 LRRC38Q5VT99 294 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 ARMCX5Q6P1M9 558 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 ADCK1Q86TW2 530 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 CCDC83Q8IWF9 413 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 LAX1Q8IWV1 398 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 NUP93Q8N1F7 819 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 GPD1LQ8N335 351 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 NKAIN3Q8N8D7 197 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 TRPV3Q8NET8 790 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 FLVCR1-AS1Q8TAF5 88 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 PRCCQ92733 491 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-206ENST00000489868 GGHQ92820 318 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 MRPL24Q96A35 216 aaKnown RBP3.88□□□□□ -1.79
CCDC39-206ENST00000489868 EPSTI1Q96J88 318 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 RAB40CQ96S21 281 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 SSX3Q99909 188 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 ZDHHC6Q9H6R6 413 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 GRPEL1Q9HAV7 217 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 ACEP12821 1306 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 UMODL1Q5DID0 1318 aa3.88□□□□□ -1.79
CCDC39-206ENST00000489868 SH3PXD2BA1X283 911 aa3.87□□□□□ -1.79
CCDC39-206ENST00000489868 H0Y626 953 aa3.87□□□□□ -1.79
CCDC39-206ENST00000489868 E2F3O00716 465 aa3.87□□□□□ -1.79
CCDC39-206ENST00000489868 OR6A2O95222 327 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms