RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	C1orf109	Q9NX04	203 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SPHK1	Q9NYA1	384 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PIM2	Q9P1W9	311 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KLF15	Q9UIH9	416 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RPS6KA6	Q9UK32	745 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FBXL2	Q9UKC9	423 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC6A14	Q9UN76	642 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SAMD4A	Q9UPU9	718 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UBIAD1	Q9Y5Z9	338 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NPTN	Q9Y639	398 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853		A0A087WZ62	844 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KRTAP9-6	A0A140TA67	174 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853		A0A1B0GW55	424 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MTMR11	A4FU01	709 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF729	A6NN14	1252 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MEIS3P2	A8K0S8	358 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CDC7	O00311	574 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GPR171	O14626	319 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC7A4	O43246	635 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MFSD11	O43934	449 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MPZL2	O60487	215 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RAD1	O60671	282 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ADAMTS4	O75173	837 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RPS6KA4	O75676	772 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AP2A2	O94973	939 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CCNB2	O95067	398 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	WISP3	O95389	354 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	POP4	O95707	220 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	IGHV2-70	P01814	119 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	IL6	P05231	212 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUX4L2	P0CJ85	424 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUX4L3	P0CJ86	424 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUX4L4	P0CJ87	422 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUX4L5	P0CJ88	424 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUX4L6	P0CJ89	424 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUX4L7	P0CJ90	424 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SULT1A3	P0DMM9	295 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SULT1A4	P0DMN0	295 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UROS	P10746	265 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PIP	P12273	146 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PEPD	P12955	493 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GOT1	P17174	413 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TAL1	P17542	331 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RHCE	P18577	417 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RAB3B	P20337	219 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HIST1H2AD	P20671	130 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PTAFR	P25105	342 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AKT1	P31749	480 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC1A2	P43004	574 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PREP	P48147	710 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GZMM	P51124	257 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	P2RY4	P51582	365 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NR0B1	P51843	470 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PGD	P52209	483 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AGFG1	P52594	562 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CAPZA1	P52907	286 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RAG2	P55895	527 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ITGA1	P56199	1179 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SOX10	P56693	466 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DHODH	Q02127	395 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MAP4K2	Q12851	820 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LCP2	Q13094	533 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HNRNPA0	Q13151	305 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GPR176	Q14439	515 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DMC1	Q14565	340 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C4orf46	Q504U0	113 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF667	Q5HYK9	610 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TCTE1	Q5JU00	501 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RNFT1	Q5M7Z0	435 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C6orf136	Q5SQH8	315 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CELF3	Q5SZQ8	465 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM171A1	Q5VUB5	890 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HIST2H2AA3	Q6FI13	130 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ESRP1	Q6NXG1	681 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EFCAB12	Q6NXP0	572 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF549	Q6P9A3	640 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CNIH2	Q6PI25	160 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AFTPH	Q6ULP2	937 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	WASH2P	Q6VEQ5	465 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SMIM5	Q71RC9	77 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TRMT11	Q7Z4G4	463 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KDELC2	Q7Z4H8	507 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PAQR7	Q86WK9	346 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PDZD9	Q8IXQ8	264 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	IL17RC	Q8NAC3	791 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	B3GNT7	Q8NFL0	401 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	IPMK	Q8NFU5	416 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	OR4A15	Q8NGL6	344 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MOSPD2	Q8NHP6	518 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UBA3	Q8TBC4	463 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SCARB1	Q8WTV0	552 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GLYATL2	Q8WU03	294 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GTF3A	Q92664	365 aa	Known RBP	4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NINJ1	Q92982	152 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HIST1H2AH	Q96KK5	128 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CXorf58	Q96LI9	332 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TMEM68	Q96MH6	324 aa		4.56	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HIST1H2AJ	Q99878	128 aa		4.56	□□□□□ -1.68

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