RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 FOXE1O00358 373 aaPredicted RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 LSM1O15116 133 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 NDUFS4O43181 175 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 OR1F1O43749 312 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 CCDC22O60826 627 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 ULK1O75385 1050 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 ATP6AP2O75787 350 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 DNAJC8O75937 253 aaPredicted RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 KLHL18O94889 574 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 BMP10O95393 424 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 KRT6AP02538 564 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 STATHP02808 62 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 KRT6BP04259 564 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 COX6A1P12074 109 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 IL1RNP18510 177 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 PRPH2P23942 346 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 EPHA3P29320 983 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 HNRNPH1P31943 449 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 AHRP35869 848 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 KRT6CP48668 564 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 RPS13P62277 151 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 AP2B1P63010 937 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 MAT1AQ00266 395 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 HMGCS1Q01581 520 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 RGS1Q08116 209 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 TBL3Q12788 808 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 CSTF3Q12996 717 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 HERC3Q15034 1050 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 KIAA0040Q15053 153 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 RBBP5Q15291 538 aaKnown RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 SYT16Q17RD7 645 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 ADPRMQ3LIE5 342 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 PLEKHN1Q494U1 663 aaPredicted RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 SGO1Q5FBB7 561 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 TMEM205Q6UW68 189 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 Q6ZS92 163 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 UBE3DQ7Z6J8 389 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 KCT2Q8NC54 265 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 ZCCHC10Q8TBK6 192 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 SELENOMQ8WWX9 145 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 METTL21AQ8WXB1 218 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 C8orf44Q96CB5 159 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 FCRL1Q96LA6 429 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 PPP1R36Q96LQ0 422 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 MACROD1Q9BQ69 325 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 WDR77Q9BQA1 342 aaPredicted RBP9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 TMEM120AQ9BXJ8 343 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 SLC6A16Q9GZN6 736 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 EPS8L2Q9H6S3 715 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 BRF2Q9HAW0 419 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 SAR1AQ9NR31 198 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 LUZP4Q9P127 313 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 ZFP69BQ9UJL9 534 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 DCTN4Q9UJW0 460 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 PRDM4Q9UKN5 801 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 MKL2Q9ULH7 1088 aa9.94□□□□□ -0.82
SCAMP4-208ENST00000489554 FLNBO75369 2602 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 GOLGA8QA0A0J9YX86 632 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 CLEC18AA5D8T8 446 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 GOLGA8OA6NCC3 632 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 GOLGA8NF8WBI6 632 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 SGK494L7N484 410 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 CRCPO75575 148 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 CLEC3AO75596 197 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 SERPINA7P05543 415 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ALDOCP09972 364 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 C8orf89P0DMQ9 161 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 SMIM10L1P0DMW3 83 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 PCNAP12004 261 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ICAM2P13598 275 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 HSD3B1P14060 373 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 IL10P22301 178 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 HSD3B2P26439 372 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 GSTM2P28161 218 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 XCR1P46094 333 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 EEF1A2Q05639 463 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 Q0VFX4 171 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 DDX39BQ13838 428 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 LSM12Q3MHD2 195 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 CRB2Q5IJ48 1285 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 C10orf62Q5T681 223 aaPredicted RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 FAAH2Q6GMR7 532 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 CLEC18BQ6UXF7 455 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ISLR2Q6UXK2 745 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 RIPOR1Q6ZS17 1223 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 PRSS41Q7RTY9 318 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 DDIASQ8IXT1 998 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 AFAP1L2Q8N4X5 818 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 FAM26EQ8N5C1 309 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 CLEC18CQ8NCF0 446 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 TRPV3Q8NET8 790 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 OR51Q1Q8NH59 317 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 NT5CQ8TCD5 201 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ACTRT2Q8TDY3 377 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 UBE2E3Q969T4 207 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 APIPQ96GX9 242 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 SMIM10Q96HG1 83 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 RAB3IPQ96QF0 476 aaPredicted RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 LMF1Q96S06 567 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms