RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TP73O15350 636 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 FAM107AO95990 144 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 CYC1P08574 325 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 CSF3P09919 207 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC35G4P0C7Q5 338 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 BMP2P12643 396 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 ETS1P14921 441 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 MMP13P45452 471 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 DIO3P55073 304 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 GDF10P55107 478 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 TPI1P60174 286 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 CDK16Q00536 496 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 TMEM115Q12893 351 aaPredicted RBP6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 TMED2Q15363 201 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 CA9Q16790 459 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 BBS9Q3SYG4 887 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 TTC19Q6DKK2 380 aaPredicted RBP6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 ASPHD2Q6ICH7 369 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 NPNTQ6UXI9 565 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 ANKRD37Q7Z713 158 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 CPLX4Q7Z7G2 160 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 PRUNE1Q86TP1 453 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 DTX2Q86UW9 622 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 NDUFAF2Q8N183 169 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 KIF2BQ8N4N8 673 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 NAT8LQ8N9F0 302 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 TFB1MQ8WVM0 346 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 C3orf49Q96BT1 292 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 LRRC39Q96DD0 335 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 PLPPR2Q96GM1 343 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 QKIQ96PU8 341 aaKnown RBP eCLIP6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 CSPG4P5Q96PW8 444 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 LYSMD1Q96S90 227 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 CYTH2Q99418 400 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 YIPF2Q9BWQ6 316 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 SUCNR1Q9BXA5 334 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 KCNK9Q9NPC2 374 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 PPANQ9NQ55 473 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 PSMC3IPQ9P2W1 217 aaPredicted RBP6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 FETUBQ9UGM5 382 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 RSPH14Q9UHP6 348 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 PACSIN3Q9UKS6 424 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 HEBP2Q9Y5Z4 205 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 ACTL7BQ9Y614 415 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC22A31A6NKX4 558 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 POC1B-GALNT4F8VUJ3 575 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 FCHO1O14526 889 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 GSTA2P09210 222 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 CHN1P15882 459 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 KRT15P19012 456 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 MAGP20916 626 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 EPHA1P21709 976 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 MDKP21741 143 aaPredicted RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 RBL1P28749 1068 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 STX2P32856 288 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 HTR7P34969 479 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 SERPINB6P35237 376 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 FDFT1P37268 417 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC26A3P40879 764 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 CCT5P48643 541 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 HNRNPH2P55795 449 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 IFI35P80217 286 aaPredicted RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 GTF2H3Q13889 308 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 KCNJ11Q14654 390 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 RASA2Q15283 850 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 RAB6CQ53S08 254 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 FNBP1LQ5T0N5 605 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 LGSNQ5TDP6 509 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 PAPD4Q6PIY7 484 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 GK5Q6ZS86 529 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 C3orf62Q6ZUJ4 267 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 TAX1BP1Q86VP1 789 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 TDRPQ86YL5 185 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 TRAM1L1Q8N609 369 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 CCDC185Q8N715 623 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 PQLC3Q8N755 202 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 ANKS4BQ8N8V4 417 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 RAB3IL1Q8TBN0 382 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 ALKBH8Q96BT7 664 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 C10orf90Q96M02 699 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 ADAD1Q96M93 576 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 PRDM14Q9GZV8 571 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 RAB6CQ9H0N0 254 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 ALG2Q9H553 416 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 XAB2Q9HCS7 855 aaKnown RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 SAMD15Q9P1V8 674 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 TBK1Q9UHD2 729 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 TMPRSS11EQ9UL52 423 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 DNMT3AQ9Y6K1 912 aaPredicted RBP6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 NINQ8N4C6 2090 aa6.8□□□□□ -1.32
EXOSC3-206ENST00000489414 C1orf232A0A0U1RR37 186 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 C5orf60A6NFR6 353 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 E7ESA3 106 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 MSTNO14793 375 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 APRTP07741 180 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 INHBAP08476 426 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 CHRM5P08912 532 aaPredicted RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 PCMT1P22061 227 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms