RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 H2AFZP0C0S5 128 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 COMPP49747 757 aaPredicted RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 ACTG1P63261 375 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 GBX1Q14549 363 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 RPS6KA1Q15418 735 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 ACSBG2Q5FVE4 666 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 LRRC38Q5VT99 294 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 FAM166AQ6J272 317 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 H2AFVQ71UI9 128 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 CLNKQ7Z7G1 428 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 MORN4Q8NDC4 146 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 OR10H5Q8NGA6 315 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 OR8K3Q8NH51 312 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 PTPMT1Q8WUK0 201 aaPredicted RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 DAZLQ92904 295 aaKnown RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 SPACA9Q96E40 222 aaPredicted RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 ZNF778Q96MU6 729 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 PPP1R2P1Q96PQ5 205 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 PACSIN1Q9BY11 444 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 KLHL4Q9C0H6 718 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 UBQLN3Q9H347 655 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 CLK4Q9HAZ1 481 aaKnown RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 EML4Q9HC35 981 aaKnown RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 CCDC177Q9NQR7 707 aaPredicted RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 CHMP5Q9NZZ3 219 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 ARMCX1Q9P291 453 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 CNOT11Q9UKZ1 510 aaKnown RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 HYOU1Q9Y4L1 999 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 CHCHD2Q9Y6H1 151 aaPredicted RBP13.65□□□□□ -0.22
UFD1-209ENST00000489406 ALPK2Q86TB3 2170 aa13.65□□□□□ -0.22
UFD1-209ENST00000489406 OR1F1O43749 312 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 NIPSNAP2O75323 286 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 CPN1P15169 458 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 IMPA1P29218 277 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 ATP5DP30049 168 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 RPL21P46778 160 aaKnown RBP13.64□□□□□ -0.23
UFD1-209ENST00000489406 HNRNPFP52597 415 aaKnown RBP13.64□□□□□ -0.23
UFD1-209ENST00000489406 PRAMEP78395 509 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 CCZ1BP86790 482 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 CCZ1P86791 482 aaPredicted RBP13.64□□□□□ -0.23
UFD1-209ENST00000489406 PWP1Q13610 501 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 MPEG1Q2M385 716 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 AARS2Q5JTZ9 985 aaKnown RBP13.64□□□□□ -0.23
UFD1-209ENST00000489406 CTSL3PQ5NE16 218 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 LYPD8Q6UX82 237 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 C17orf64Q86WR6 236 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 KLHDC8BQ8IXV7 354 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 TMEM52Q8NDY8 209 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 LILRB1Q8NHL6 650 aaPredicted RBP13.64□□□□□ -0.23
UFD1-209ENST00000489406 SMAP2Q8WU79 429 aaPredicted RBP13.64□□□□□ -0.23
UFD1-209ENST00000489406 CTNNBL1Q8WYA6 563 aaPredicted RBP13.64□□□□□ -0.23
UFD1-209ENST00000489406 CAVIN3Q969G5 261 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 FBXW5Q969U6 566 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 GNRHR2Q96P88 292 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 CATSPERZQ9NTU4 200 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 GALPQ9UBC7 116 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 CLCF1Q9UBD9 225 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 DTX4Q9Y2E6 619 aa13.64□□□□□ -0.23
UFD1-209ENST00000489406 RYR3Q15413 4870 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 hCG_1818297A0A087WSY0 165 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 CDH1P12830 882 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 TNNI3P19429 210 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 TBXA2RP21731 343 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 TTPAP49638 278 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 HSD17B7P56937 341 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 TBPL1P62380 186 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 RGS1Q08116 209 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 TSTD2Q5T7W7 516 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 YRDCQ86U90 279 aaKnown RBP13.63□□□□□ -0.23
UFD1-209ENST00000489406 WFDC8Q8IUA0 241 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 GRAMD2AQ8IUY3 354 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 SLC2A12Q8TD20 617 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 ATL1Q8WXF7 558 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 RUNDC3BQ96NL0 473 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 UCN2Q96RP3 112 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 G6PC3Q9BUM1 346 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 MANSC1Q9H8J5 431 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 LRRC40Q9H9A6 602 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 INTUQ9ULD6 942 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 C15orf41Q9Y2V0 281 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 BZW2Q9Y6E2 419 aaKnown RBP13.63□□□□□ -0.23
UFD1-209ENST00000489406 VWFP04275 2813 aa13.63□□□□□ -0.23
UFD1-209ENST00000489406 LOC100289279A0A1B0GTE1 492 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 A0A1W2PP18 115 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 TGM6O95932 706 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 ACTL6AO96019 429 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 FMO4P31512 558 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 NUDT6P53370 316 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 CLEC2AQ6UVW9 174 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 REXO1L1PQ8IX06 675 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 OR14A16Q8NHC5 309 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 DIO2Q92813 273 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 NEUROG1Q92886 237 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 GCDHQ92947 438 aaPredicted RBP13.62□□□□□ -0.23
UFD1-209ENST00000489406 ALKBH8Q96BT7 664 aaKnown RBP13.62□□□□□ -0.23
UFD1-209ENST00000489406 REPS1Q96D71 796 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 HEMGNQ9BXL5 484 aa13.62□□□□□ -0.23
UFD1-209ENST00000489406 KLHL31Q9H511 634 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms