RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 REEP1Q9H902 201 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 MIEF1Q9NQG6 463 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 ACSS1Q9NUB1 689 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 SH3BP4Q9P0V3 963 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 FAF1Q9UNN5 650 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PCDHGB5Q9Y5G0 923 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 PCDHGB1Q9Y5G3 927 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 KCNMB2Q9Y691 235 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 CEPT1Q9Y6K0 416 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 CROCCQ5TZA2 2017 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 TRPM6Q9BX84 2022 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 CABIN1Q9Y6J0 2220 aa8.06□□□□□ -1.12
VTI1A-207ENST00000489357 LOC100130705A0A1B0GUX0 176 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 A0A1W2PRB8 838 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 TRIM64BA6NI03 449 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 PLOD2O00469 737 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 PDE9AO76083 593 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF682O95780 498 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 C9P02748 559 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 MT-ND1P03886 318 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 PCCBP05166 539 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ARAFP10398 606 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 HOXB2P14652 356 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 CRHBPP24387 322 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 IGFBP5P24593 272 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 DCKP27707 260 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 GRK3P35626 688 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 AHRP35869 848 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 PEX19P40855 299 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 FNTBP49356 437 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ANXA11P50995 505 aaKnown RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 MVDP53602 400 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 MAPK12P53778 367 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 TMBIM6P55061 237 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 NUP107P57740 925 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 HBA1P69905 142 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 PRDX1Q06830 199 aaKnown RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 C2orf80Q0P641 193 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 KCNAB2Q13303 367 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 SLC14A1Q13336 389 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 IRF4Q15306 451 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 LRRC23Q53EV4 343 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 GCNT6Q5T4J0 391 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF468Q5VIY5 522 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF691Q5VV52 312 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 TBPL2Q6SJ96 375 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ZNF551Q7Z340 670 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 C11orf74Q86VG3 221 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 TSPYL5Q86VY4 417 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 HORMAD1Q86X24 394 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ARMC8Q8IUR7 673 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 CLECL1Q8IZS7 167 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 GPR156Q8NFN8 814 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 OR5AR1Q8NGP9 310 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 NUDT8Q8WV74 236 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ZFPM2Q8WW38 1151 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ZBED6CLQ96FA7 236 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 FBXL20Q96IG2 436 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 MUS81Q96NY9 551 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 SLC35A5Q9BS91 424 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 SLC17A9Q9BYT1 436 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 NLNQ9BYT8 704 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 BTBD1Q9H0C5 482 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 DDX31Q9H8H2 851 aaKnown RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 CARS2Q9HA77 564 aaKnown RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 CCNB1IP1Q9NPC3 277 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 TMEM184CQ9NVA4 438 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 USP36Q9P275 1121 aaKnown RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 PCOLCE2Q9UKZ9 415 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 EXO1Q9UQ84 846 aaKnown RBP8.05□□□□□ -1.12
VTI1A-207ENST00000489357 ANGPT4Q9Y264 503 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 BTBD3Q9Y2F9 522 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 NAALAD2Q9Y3Q0 740 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 COLEC10Q9Y6Z7 277 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 V9GYQ6 96 aa8.05□□□□□ -1.12
VTI1A-207ENST00000489357 MYO15AQ9UKN7 3530 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 KRT87PA6NCN2 255 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 CCDC160A6NGH7 325 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 PLPP1O14494 284 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TNFRSF10CO14798 259 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 HS6ST1O60243 411 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 NOL3O60936 208 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TRMUO75648 421 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 CPSF4O95639 269 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TGFB1P01137 390 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 PDGFAP04085 211 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 ANXA8P13928 327 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TPP2P29144 1249 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 PKLRP30613 574 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 SHMT2P34897 504 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 BSGP35613 385 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 WASP42768 502 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 PRIM2P49643 509 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TPD52P55327 224 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 PCBP3P57721 371 aaKnown RBP8.04□□□□□ -1.12
VTI1A-207ENST00000489357 TAS2R50P59544 299 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 ISL1P61371 349 aa8.04□□□□□ -1.12
VTI1A-207ENST00000489357 MVKQ03426 396 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms