RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 LRRTM2O43300 516 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 FGF17O60258 216 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 EEDO75530 441 aaKnown RBP23.27■■□□□ 1.32
HMGN1-217ENST00000489072 SLC25A12O75746 678 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 RPS17P08708 135 aaKnown RBP23.27■■□□□ 1.32
HMGN1-217ENST00000489072 BSGP35613 385 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 ARL1P40616 181 aaPredicted RBP23.27■■□□□ 1.32
HMGN1-217ENST00000489072 CYB561P49447 251 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 HLCSP50747 726 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 ARFIP1P53367 373 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 HNRNPH2P55795 449 aaKnown RBP23.27■■□□□ 1.32
HMGN1-217ENST00000489072 PHEXP78562 749 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 CUL3Q13618 768 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 SLC29A2Q14542 456 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 HIST2H2BCQ6DN03 193 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 GFRALQ6UXV0 394 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 ZNF321PQ8N8H1 164 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 TMEM178AQ8NBL3 297 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 CENPKQ9BS16 269 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 ATG4BQ9Y4P1 393 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 CLCA3PQ9Y6N3 262 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 A0A1B0GTL3 188 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 A1L4Q6 167 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 A8MT66 165 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 FOXE1O00358 373 aaPredicted RBP23.26■■□□□ 1.31
HMGN1-217ENST00000489072 FCHO1O14526 889 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 PRKRAO75569 313 aaKnown RBP23.26■■□□□ 1.31
HMGN1-217ENST00000489072 UNC5CO95185 931 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 STSP08842 583 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 SERTAD2Q14140 314 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 LGSNQ5TDP6 509 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 C18orf63Q68DL7 685 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 C16orf47Q6ZP98 133 aaPredicted RBP23.26■■□□□ 1.31
HMGN1-217ENST00000489072 GPR180Q86V85 440 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 OR4N5Q8IXE1 308 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 OR14A16Q8NHC5 309 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 ZNF483Q8TF39 744 aaPredicted RBP23.26■■□□□ 1.31
HMGN1-217ENST00000489072 MTFMTQ96DP5 389 aaKnown RBP23.26■■□□□ 1.31
HMGN1-217ENST00000489072 MTBPQ96DY7 904 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 FRMD6Q96NE9 622 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 SEMA4BQ9NPR2 832 aaPredicted RBP23.26■■□□□ 1.31
HMGN1-217ENST00000489072 PSD3Q9NYI0 1048 aa23.26■■□□□ 1.31
HMGN1-217ENST00000489072 A0A0A6YYD5 115 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 PPP6CO00743 305 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 TMPRSS11DO60235 418 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 NME2P1O60361 137 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 ITGA10O75578 1167 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 ZFAND5O76080 213 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 NME2P22392 152 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 IGLV3-21P80748 117 aaPredicted RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 TNFRSF17Q02223 184 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 MAPKAPK3Q16644 382 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 FAM219BQ5XKK7 198 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 MRM1Q6IN84 353 aaKnown RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 MORN4Q8NDC4 146 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 SREK1Q8WXA9 508 aaKnown RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 DAZLQ92904 295 aaKnown RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 CCDC77Q9BR77 488 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 RPF2Q9H7B2 306 aaKnown RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 DDX31Q9H8H2 851 aaKnown RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 LIN28AQ9H9Z2 209 aaKnown RBP23.25■■□□□ 1.31
HMGN1-217ENST00000489072 MS4A12Q9NXJ0 267 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 TMEM216Q9P0N5 145 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 SEC14L3Q9UDX4 400 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 PHF11Q9UIL8 331 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 PPT2Q9UMR5 302 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 ASB4Q9Y574 426 aa23.25■■□□□ 1.31
HMGN1-217ENST00000489072 C17orf105B2RV13 164 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 TSPAN8P19075 237 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 C1QL3Q5VWW1 255 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 FRG2Q64ET8 278 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 OR4F6Q8NGB9 312 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 FRG2BQ96QU4 278 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 C1QTNF3Q9BXJ4 246 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 OR8D2Q9GZM6 311 aa23.24■■□□□ 1.31
HMGN1-217ENST00000489072 WASHC1A8K0Z3 465 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 PROM1O43490 865 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 CLDN1O95832 211 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 TNNI3P19429 210 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 CDH13P55290 713 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 FOLH1Q04609 750 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 GGTA1PQ4G0N0 100 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 TEX35Q5T0J7 233 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 HSDL2Q6YN16 418 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 MILR1Q7Z6M3 343 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 SLC2A12Q8TD20 617 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 MZB1Q8WU39 189 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 TSPAN10Q9H1Z9 355 aaPredicted RBP23.23■■□□□ 1.31
HMGN1-217ENST00000489072 L2HGDHQ9H9P8 463 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 LYARQ9NX58 379 aaKnown RBP23.23■■□□□ 1.31
HMGN1-217ENST00000489072 PSMC3IPQ9P2W1 217 aaPredicted RBP23.23■■□□□ 1.31
HMGN1-217ENST00000489072 FETUBQ9UGM5 382 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 GTF3C1Q12789 2109 aa23.23■■□□□ 1.31
HMGN1-217ENST00000489072 A0A1W2PR48 441 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 GBAP04062 536 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 FAM58BPP0C7Q3 252 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 STT3AP46977 705 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 SSR4P51571 173 aa23.22■■□□□ 1.31
HMGN1-217ENST00000489072 ALDH6A1Q02252 535 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms