RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TUBBP07437 444 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 NUDT17P0C025 328 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 FAM58BPP0C7Q3 252 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 KRT4P19013 534 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 BSGP35613 385 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 PKNOX1P55347 436 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 TNFRSF17Q02223 184 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 OC90Q02509 493 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-218ENST00000489037 INAQ16352 499 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 PRR30Q53SZ7 412 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-218ENST00000489037 FAM180AQ6UWF9 173 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 ZYG11AQ6WRX3 759 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 CCNYL1Q8N7R7 359 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 NFAM1Q8NET5 270 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-218ENST00000489037 OR14A16Q8NHC5 309 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 RDH11Q8TC12 318 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 METTL6Q8TCB7 284 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 AENQ8WTP8 325 aaKnown RBP13.35□□□□□ -0.27
BRCA1-218ENST00000489037 CAVIN3Q969G5 261 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 L3HYPDHQ96EM0 354 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 DGAT2Q96PD7 388 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 ZNF382Q96SR6 550 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 BRF2Q9HAW0 419 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 VTI1BQ9UEU0 232 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 ADAM29Q9UKF5 820 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 SLC12A4Q9UP95 1085 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 TRBV11-1A0A0K0K1C0 115 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 GABRR3A8MPY1 467 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 H3BQF6 201 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 PRAMEF2O60811 474 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 ZFAND5O76080 213 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 ETHE1O95571 254 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 PDYNP01213 254 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 ENO1P06733 434 aaKnown RBP13.34□□□□□ -0.27
BRCA1-218ENST00000489037 CD46P15529 392 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 LCP2Q13094 533 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 ERCC6LQ2NKX8 1250 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 CCNYL2Q5T2Q4 361 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 LETMD1Q6P1Q0 360 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 C4orf33Q8N1A6 199 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 KIF2BQ8N4N8 673 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 BCORP1Q8N888 145 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 CDYL2Q8N8U2 506 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 MORN4Q8NDC4 146 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 OR2W6PQ8NHA6 318 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 NCLNQ969V3 563 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 C19orf60Q96EN9 201 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
BRCA1-218ENST00000489037 C5orf34Q96MH7 638 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 PELOQ9BRX2 385 aaKnown RBP13.34□□□□□ -0.27
BRCA1-218ENST00000489037 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
BRCA1-218ENST00000489037 PRRC2CQ9Y520 2896 aaKnown RBP13.33□□□□□ -0.28
BRCA1-218ENST00000489037 A0A0A6YYD5 115 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 MYOCOSA0A1B0GUC4 107 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 C17orf105B2RV13 164 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 TGFBR3LH3BV60 316 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 PPP6CO00743 305 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 PROM1O43490 865 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 PLIN3O60664 434 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 ULK1O75385 1050 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 EEDO75530 441 aaKnown RBP13.33□□□□□ -0.28
BRCA1-218ENST00000489037 CRCPO75575 148 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 RASAL1O95294 804 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 PROCP04070 461 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 KLK1P06870 262 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 NR2F6P10588 404 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 HSD3B1P14060 373 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 CPA3P15088 417 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 GNLYP22749 145 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 HSD3B2P26439 372 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 HNRNPH2P55795 449 aaKnown RBP13.33□□□□□ -0.28
BRCA1-218ENST00000489037 PLIN5Q00G26 463 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 ID2Q02363 134 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 ASPHQ12797 758 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 ZNF766Q5HY98 468 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 C18orf63Q68DL7 685 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 GRHL3Q8TE85 626 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 ART5Q96L15 291 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 MID1IP1Q9NPA3 183 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 COPS7AQ9UBW8 275 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 EMCNQ9ULC0 261 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 PPIEQ9UNP9 301 aaKnown RBP13.33□□□□□ -0.28
BRCA1-218ENST00000489037 ATG4BQ9Y4P1 393 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 ASB4Q9Y574 426 aa13.33□□□□□ -0.28
BRCA1-218ENST00000489037 TCP11X1B4DZS4 312 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 G3V2L1 256 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 MANBAO00462 879 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 TMPRSS11DO60235 418 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 FGF17O60258 216 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 OR10H2O60403 315 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 ESRRBO95718 433 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 CRYABP02511 175 aaKnown RBP13.32□□□□□ -0.28
BRCA1-218ENST00000489037 GBAP04062 536 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 CD96P40200 585 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 STT3AP46977 705 aa13.32□□□□□ -0.28
BRCA1-218ENST00000489037 CYB561P49447 251 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms