RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 MAPKAP1Q9BPZ7 522 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 MARVELD1Q9BSK0 173 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 RC3H2Q9HBD1 1191 aaKnown RBP13.58□□□□□ -0.24
RER1-207ENST00000488353 SPG21Q9NZD8 308 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 ELF5Q9UKW6 265 aaPredicted RBP13.58□□□□□ -0.24
RER1-207ENST00000488353 SLC43A1O75387 559 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 MTRF1O75570 445 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 TRBC1P01850 177 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 ARSBP15848 533 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 EPORP19235 508 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SELENOWP63302 87 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 RGS1Q08116 209 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 TEX261Q6UWH6 196 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 GPR155Q7Z3F1 870 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 C1orf52Q8N6N3 182 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 ATP6V1C2Q8NEY4 427 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 LHFPL5Q8TAF8 219 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SH3KBP1Q96B97 665 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 IL21Q9HBE4 155 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SAGE1Q9NXZ1 904 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 PLEKHB1Q9UF11 243 aaPredicted RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 NDRG2Q9UN36 371 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 CLCA3PQ9Y6N3 262 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 U3KQ87 197 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 CDH23Q9H251 3354 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 GREM1O60565 184 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 CSO75390 466 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 GABRR2P28476 465 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SSTR4P31391 388 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 TALDO1P37837 337 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 MAN2A2P49641 1150 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 CDH12P55289 794 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SPIBQ01892 262 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SRSF11Q05519 484 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 RFLNAQ6ZTI6 216 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 KIF18BQ86Y91 864 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 SLC34A3Q8N130 599 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 OR8H3Q8N146 312 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 APIPQ96GX9 242 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 POLR2J2Q9GZM3 115 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 ANKRA2Q9H9E1 313 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 MRPL17Q9NRX2 175 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 MRPL39Q9NYK5 338 aaKnown RBP13.57□□□□□ -0.24
RER1-207ENST00000488353 NLKQ9UBE8 527 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 PCDHGB7Q9Y5F8 929 aa13.57□□□□□ -0.24
RER1-207ENST00000488353 AP2A2O94973 939 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 ANXA5P08758 320 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 CLTBP09497 229 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 CKMT1AP12532 417 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 ATF4P18848 351 aaPredicted RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 PRPS1L1P21108 318 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 WDR5P61964 334 aaKnown RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 EXOC3L2Q2M3D2 409 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 ZXDCQ2QGD7 858 aaPredicted RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 TPGS1Q6ZTW0 290 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 GAREM2Q75VX8 874 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 OTOP2Q7RTS6 562 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 BBS7Q8IWZ6 715 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 TCEAL8Q8IYN2 117 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 Q8N402 240 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 GPR26Q8NDV2 337 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 AP3S1Q92572 193 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 AKAP1Q92667 903 aaKnown RBP eCLIP13.56□□□□□ -0.24
RER1-207ENST00000488353 APOLD1Q96LR9 279 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 GPR137Q96N19 417 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 MND1Q9BWT6 205 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 EBPLQ9BY08 206 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 KCNN2Q9H2S1 579 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 ELOVL6Q9H5J4 265 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 TPT1P8Q9HAU6 139 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 TMCC3Q9ULS5 477 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 CLEC4EQ9ULY5 219 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 OR51B4Q9Y5P0 310 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 SCN8AQ9UQD0 1980 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 PRRC2BQ5JSZ5 2229 aaKnown RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 ALPK3Q96L96 1907 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 TRAV19A0A0A6YYK7 116 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 TMEM229AB2RXF0 380 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 LYRM1O43325 122 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 TPST2O60704 377 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 CPSF4O95639 269 aaKnown RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 CKMP06732 381 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 FAM157BP0CG42 384 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 PRPH2P23942 346 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 AQP1P29972 269 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 EVI2BP34910 448 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 MEDAGQ5VYS4 303 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 GLCCI1Q86VQ1 547 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 ZNF680Q8NEM1 530 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 CDC26Q8NHZ8 85 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 UBTD2Q8WUN7 234 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 KLHL6Q8WZ60 621 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 ZBED6CLQ96FA7 236 aaPredicted RBP13.56□□□□□ -0.24
RER1-207ENST00000488353 CMTM7Q96FZ5 175 aa13.56□□□□□ -0.24
RER1-207ENST00000488353 SAMD11Q96NU1 681 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms