RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SLC48A1Q6P1K1 146 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 C6orf15Q6UXA7 325 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-242ENST00000488013 OVCH1Q7RTY7 1134 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 TICAM1Q8IUC6 712 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 FAM47BQ8NA70 645 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 OR4K14Q8NGD5 310 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 SPDL1Q96EA4 605 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 NSL1Q96IY1 281 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 MARK4Q96L34 752 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 OR52E6Q96RD3 313 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 CTRCQ99895 268 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 MAPKAP1Q9BPZ7 522 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 DUSP26Q9BV47 211 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 ACTL8Q9H568 366 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 WDR54Q9H977 334 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 EFCAB1Q9HAE3 211 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 NEUROD4Q9HD90 331 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 APMAPQ9HDC9 416 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 SLC35C2Q9NQQ7 365 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 ARMCX1Q9P291 453 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 IFT80Q9P2H3 777 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-242ENST00000488013 GPN3Q9UHW5 284 aaPredicted RBP10.42□□□□□ -0.74
HDLBP-242ENST00000488013 TAGLN3Q9UI15 199 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 UTS2RQ9UKP6 389 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 SATB2Q9UPW6 733 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 ENTPD4Q9Y227 616 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 PADI2Q9Y2J8 665 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 B3GALT1Q9Y5Z6 326 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 ZNF292O60281 2723 aa10.42□□□□□ -0.74
HDLBP-242ENST00000488013 RALGAPA1Q6GYQ0 2036 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 UNC13CQ8NB66 2214 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 RP1P56715 2156 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 ZNF860A6NHJ4 632 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 GABRR3A8MPY1 467 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 C4orf51C9J302 202 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 STMND1H3BQB6 276 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 AKAP10O43572 662 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 DYRK3O43781 588 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 STK17BO94768 372 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 KIAA0754O94854 1291 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 LRATO95237 230 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 GPR75O95800 540 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 NTRK1P04629 796 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 IFI6P09912 130 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 ESRRAP11474 423 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-242ENST00000488013 CSNK2A2P19784 350 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-242ENST00000488013 XCR1P46094 333 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 ALDH9A1P49189 494 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 HNRNPFP52597 415 aaKnown RBP10.41□□□□□ -0.74
HDLBP-242ENST00000488013 HNRNPH2P55795 449 aaKnown RBP10.41□□□□□ -0.74
HDLBP-242ENST00000488013 SHC2P98077 582 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 MLC1Q15049 377 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 MAPKAPK3Q16644 382 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 PGS1Q32NB8 556 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 FAM219BQ5XKK7 198 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 C6orf89Q6UWU4 347 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 ZNF517Q6ZMY9 492 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-242ENST00000488013 QSOX2Q6ZRP7 698 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 CCDC121Q6ZUS5 278 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 KRTCAP2Q8N6L1 136 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 TRIML2Q8N7C3 387 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 AMER3Q8N944 861 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 CLHC1Q8NHS4 586 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 NACC2Q96BF6 587 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 ROPN1LQ96C74 230 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 ITCHQ96J02 903 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 VPS50Q96JG6 964 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 EGLN2Q96KS0 407 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 SLC46A1Q96NT5 459 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 YIPF2Q9BWQ6 316 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 THSD1Q9NS62 852 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 GID8Q9NWU2 228 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 TEX10Q9NXF1 929 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-242ENST00000488013 HCN3Q9P1Z3 774 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 BTNL2Q9UIR0 455 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 LEF1Q9UJU2 399 aaPredicted RBP10.41□□□□□ -0.74
HDLBP-242ENST00000488013 ACSL6Q9UKU0 697 aa10.41□□□□□ -0.74
HDLBP-242ENST00000488013 PCNX2A6NKB5 2137 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 TP53BP1Q12888 1972 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 DCDC2BA2VCK2 349 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 C21orf140B9A014 251 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 NR5A2O00482 541 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 PDPK1O15530 556 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 ERN1O75460 977 aaKnown RBP10.4□□□□□ -0.74
HDLBP-242ENST00000488013 MED26O95402 600 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 TIAF1O95411 115 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 RAB40ALP0C0E4 278 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 SLC35E2P0CK97 266 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 COX4I1P13073 169 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 ITIH1P19827 911 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 GALNSP34059 522 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 OR1D4P47884 311 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 TRPC1P48995 793 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 NME5P56597 212 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 GABREP78334 506 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 STX4Q12846 297 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 SLC13A2Q13183 592 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 ART3Q13508 389 aa10.4□□□□□ -0.74
HDLBP-242ENST00000488013 RTP5Q14D33 572 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms