RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 FOXD2O60548 495 aaPredicted RBP13.45□□□□□ -0.26
CUX1-209ENST00000487284 PRAMEF10O60809 474 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 C6orf47O95873 294 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 C1QCP02747 245 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 ABCB1P08183 1280 aaPredicted RBP13.45□□□□□ -0.26
CUX1-209ENST00000487284 FAM58BPP0C7Q3 252 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 SLC35G6P0C7Q6 338 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 DRD2P14416 443 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 ST6GAL1P15907 406 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 CDH3P22223 829 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 ATP5A1P25705 553 aaKnown RBP13.45□□□□□ -0.26
CUX1-209ENST00000487284 SOX11P35716 441 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 FRKP42685 505 aaPredicted RBP13.45□□□□□ -0.26
CUX1-209ENST00000487284 CCL7P80098 99 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 TGM3Q08188 693 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 MAP7Q14244 749 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 CYP51A1Q16850 503 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 CMPK2Q5EBM0 449 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 STPG1Q5TH74 334 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 LPCAT4Q643R3 524 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 ACOT4Q8N9L9 421 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 DNAJC9Q8WXX5 260 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 ZFYVE21Q9BQ24 234 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 NUDT22Q9BRQ3 303 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 SPATA9Q9BWV2 254 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 TAS2R9Q9NYW1 312 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 TAS2R7Q9NYW3 318 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 EHD3Q9NZN3 535 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 TMEM9Q9P0T7 183 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 ANAPC2Q9UJX6 822 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 PCDHGB4Q9UN71 923 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 CORO2BQ9UQ03 480 aa13.45□□□□□ -0.26
CUX1-209ENST00000487284 DMXL1Q9Y485 3027 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 A0A1W2PRB8 838 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 CXCR6O00574 342 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 GSTA4O15217 222 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 GMNNO75496 209 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 RPLP0P05388 317 aaKnown RBP13.44□□□□□ -0.26
CUX1-209ENST00000487284 SLC9A5Q14940 896 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 TBCELQ5QJ74 424 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 CPZQ66K79 652 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 ERMP1Q7Z2K6 904 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 TMPRSS9Q7Z410 1059 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 PLXDC1Q8IUK5 500 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 OR8K5Q8NH50 307 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 ZDHHC12Q96GR4 267 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 FCRL4Q96PJ5 515 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 TRAPPC9Q96Q05 1148 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 ZNF184Q99676 751 aaPredicted RBP13.44□□□□□ -0.26
CUX1-209ENST00000487284 KLHL4Q9C0H6 718 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 CHST8Q9H2A9 424 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 SEMA6CQ9H3T2 930 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 LRRN3Q9H3W5 708 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 SYNDIG1Q9H7V2 258 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 ASB4Q9Y574 426 aa13.44□□□□□ -0.26
CUX1-209ENST00000487284 MN1Q10571 1320 aaPredicted RBP13.44□□□□□ -0.26
CUX1-209ENST00000487284 A0A0J9YVX5 310 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 TLCD2A6NGC4 264 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 SLC9B1P1A6NJY1 282 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 PDPK1O15530 556 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 P2RX6O15547 441 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 HNRNPRO43390 633 aaKnown RBP13.43□□□□□ -0.26
CUX1-209ENST00000487284 GUCY1B2O75343 617 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 KCNK5O95279 499 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 CPNE6O95741 557 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 C9P02748 559 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 SMIM10L1P0DMW3 83 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 IL10P22301 178 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 ACP1P24666 158 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 CERS1P27544 350 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 ALDH9A1P49189 494 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 PCBP4P57723 403 aaKnown RBP13.43□□□□□ -0.26
CUX1-209ENST00000487284 TAF11Q15544 211 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 NDUFAF5Q5TEU4 345 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 ERICH5Q6P6B1 374 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 WDR74Q6RFH5 385 aaPredicted RBP13.43□□□□□ -0.26
CUX1-209ENST00000487284 IZUMO2Q6UXV1 221 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 ZZZ3Q8IYH5 903 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 TRIML2Q8N7C3 387 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 KCT2Q8NC54 265 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 CAMKVQ8NCB2 501 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 ADCY4Q8NFM4 1077 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 FAM110BQ8TC76 370 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 LRTOMTQ8WZ04 291 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 OR5P2Q8WZ92 322 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 FIG4Q92562 907 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 SMIM10Q96HG1 83 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 FAIM2Q9BWQ8 316 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 C1GALT1Q9NS00 363 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 AURKCQ9UQB9 309 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 SCN2AQ99250 2005 aa13.43□□□□□ -0.26
CUX1-209ENST00000487284 IGHV5-51A0A0C4DH38 117 aa13.42□□□□□ -0.26
CUX1-209ENST00000487284 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.42□□□□□ -0.26
CUX1-209ENST00000487284 CREG1O75629 220 aa13.42□□□□□ -0.26
CUX1-209ENST00000487284 TIPRLO75663 272 aa13.42□□□□□ -0.26
CUX1-209ENST00000487284 MVDP53602 400 aa13.42□□□□□ -0.26
CUX1-209ENST00000487284 RAB8AP61006 207 aa13.42□□□□□ -0.26
CUX1-209ENST00000487284 SLAMF1Q13291 335 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms