RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GPR21Q99679 349 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 AIF1LQ9BQI0 150 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 WDR83Q9BRX9 315 aaKnown RBP7.03□□□□□ -1.28
PDPN-205ENST00000487038 DOHHQ9BU89 302 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 TRIM54Q9BYV2 358 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 TSGA10Q9BZW7 698 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 PIGMQ9H3S5 423 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 CXorf56Q9H5V9 222 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 COPS7BQ9H9Q2 264 aaPredicted RBP7.03□□□□□ -1.28
PDPN-205ENST00000487038 PARVBQ9HBI1 364 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 SEMA4BQ9NPR2 832 aaPredicted RBP7.03□□□□□ -1.28
PDPN-205ENST00000487038 SYBUQ9NX95 663 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 TRMT1Q9NXH9 659 aaKnown RBP7.03□□□□□ -1.28
PDPN-205ENST00000487038 TRMT6Q9UJA5 497 aaKnown RBP7.03□□□□□ -1.28
PDPN-205ENST00000487038 AMFRQ9UKV5 643 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 SOX13Q9UN79 622 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 PDE10AQ9Y233 779 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 DYRK1BQ9Y463 629 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 TESMINQ9Y4I5 508 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 PCDHA13Q9Y5I0 950 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 MEGF8Q7Z7M0 2845 aa7.03□□□□□ -1.28
PDPN-205ENST00000487038 NINQ8N4C6 2090 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 C17orf105B2RV13 164 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 AKR1B15C9JRZ8 316 aaPredicted RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 TLX2O43763 284 aaPredicted RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 LIASO43766 372 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TMCC2O75069 709 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TRAPPC6AO75865 159 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SERPINA6P08185 405 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 RFPL3SP0C7P2 107 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SMIM10L1P0DMW3 83 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 MGAT1P26572 445 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 GSTM2P28161 218 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SERPINB3P29508 390 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 RPL22P35268 128 aaKnown RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 AGFG1P52594 562 aaKnown RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 AP1S2P56377 157 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 EEF1A1P68104 462 aaKnown RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 BTN3A2P78410 334 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 REEP5Q00765 189 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 DHX9Q08211 1270 aaKnown RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 ASPHQ12797 758 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SERTAD2Q14140 314 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 EFTUD2Q15029 972 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDPN-205ENST00000487038 RBBP5Q15291 538 aaKnown RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 OASLQ15646 514 aaKnown RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 SEL1L2Q5TEA6 688 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 EEF1A1P5Q5VTE0 462 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 NEPROQ6NW34 567 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 CES3Q6UWW8 571 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 CYHR1Q6ZMK1 362 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 MBOAT1Q6ZNC8 495 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 CENPUQ71F23 418 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 PEX26Q7Z412 305 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 CLNKQ7Z7G1 428 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TMPRSS11BQ86T26 416 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 VSTM4Q8IW00 320 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 LMNTD2Q8IXW0 634 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 CCDC170Q8IYT3 715 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SYCE1Q8N0S2 351 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 MEIOBQ8N635 442 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SLC15A4Q8N697 577 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 ZNF441Q8N8Z8 693 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 FAM13CQ8NE31 585 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TTLQ8NG68 377 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 NUBPLQ8TB37 319 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SLC2A12Q8TD20 617 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TMEM171Q8WVE6 324 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SREK1Q8WXA9 508 aaKnown RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 ATG4AQ8WYN0 398 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 UCN3Q969E3 161 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 PYCR2Q96C36 320 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SPACA9Q96E40 222 aaPredicted RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 PIK3IP1Q96FE7 263 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SMIM10Q96HG1 83 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 ART5Q96L15 291 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TIMP4Q99727 224 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TM9SF2Q99805 663 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 AMBRA1Q9C0C7 1298 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 CALHM2Q9HA72 323 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 PELI2Q9HAT8 420 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 FBXO6Q9NRD1 293 aaPredicted RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 HOMER3Q9NSC5 361 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDPN-205ENST00000487038 ARL15Q9NXU5 204 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 C6orf203Q9P0P8 240 aaPredicted RBP7.02□□□□□ -1.29
PDPN-205ENST00000487038 VTI1BQ9UEU0 232 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 ADAMTS6Q9UKP5 1117 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 TFR2Q9UP52 801 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 SPACA6W5XKT8 324 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 MGAM2Q2M2H8 2515 aa7.02□□□□□ -1.29
PDPN-205ENST00000487038 ABCA1O95477 2261 aa7.01□□□□□ -1.29
PDPN-205ENST00000487038 LRRC3CA6NJW4 275 aa7.01□□□□□ -1.29
PDPN-205ENST00000487038 CAPN14A8MX76 684 aa7.01□□□□□ -1.29
PDPN-205ENST00000487038 KDM4EB2RXH2 506 aaPredicted RBP7.01□□□□□ -1.29
PDPN-205ENST00000487038 TGFBR3LH3BV60 316 aa7.01□□□□□ -1.29
PDPN-205ENST00000487038 PHF1O43189 567 aaPredicted RBP7.01□□□□□ -1.29
PDPN-205ENST00000487038 CTIFO43310 598 aaKnown RBP7.01□□□□□ -1.29
PDPN-205ENST00000487038 ERI3O43414 337 aaKnown RBP7.01□□□□□ -1.29
PDPN-205ENST00000487038 C1QAP02745 245 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms