RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 PAFAH2Q99487 392 aa13.42□□□□□ -0.26
CLDN11-207ENST00000486975 MAPKAP1Q9BPZ7 522 aa13.42□□□□□ -0.26
CLDN11-207ENST00000486975 CCDC77Q9BR77 488 aa13.42□□□□□ -0.26
CLDN11-207ENST00000486975 CENPKQ9BS16 269 aa13.42□□□□□ -0.26
CLDN11-207ENST00000486975 VPS11Q9H270 941 aa13.42□□□□□ -0.26
CLDN11-207ENST00000486975 ZNF835Q9Y2P0 537 aa13.42□□□□□ -0.26
CLDN11-207ENST00000486975 KLF13Q9Y2Y9 288 aaPredicted RBP13.42□□□□□ -0.26
CLDN11-207ENST00000486975 YARS2Q9Y2Z4 477 aaKnown RBP13.42□□□□□ -0.26
CLDN11-207ENST00000486975 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
CLDN11-207ENST00000486975 RTCAO00442 366 aaKnown RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 PLPP1O14494 284 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 SLC19A2O60779 497 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 KRT38O76015 456 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 PTX3P26022 381 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 PHEXP78562 749 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 IGLV3-21P80748 117 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 BIKQ13323 160 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 CUL3Q13618 768 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 GTF2H2Q13888 395 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 MAPKAPK3Q16644 382 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 TSNAXIP1Q2TAA8 658 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 C10orf62Q5T681 223 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 GTF2H2CQ6P1K8 395 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 Q6ZPB1 254 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 CLNKQ7Z7G1 428 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 PLD6Q8N2A8 252 aaKnown RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 PTPMT1Q8WUK0 201 aaPredicted RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 IFT81Q8WYA0 676 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 REPIN1Q9BWE0 567 aaKnown RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 ALOXE3Q9BYJ1 711 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 OR51B5Q9H339 312 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 IPPKQ9H8X2 491 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 SUCOQ9UBS9 1254 aaKnown RBP13.41□□□□□ -0.26
CLDN11-207ENST00000486975 PHF11Q9UIL8 331 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 FBXW2Q9UKT8 454 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 IKBKGQ9Y6K9 419 aa13.41□□□□□ -0.26
CLDN11-207ENST00000486975 TRGV8A0A0C4DH27 118 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 LRRC14BA6NHZ5 514 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 TMEM200CA6NKL6 621 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 STX16-NPEPL1H3BU86 382 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 FOXE1O00358 373 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 STX16O14662 325 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 WISP2O76076 250 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 IFNA16P05015 189 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 ZNF24P17028 368 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 CPN2P22792 545 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 DCTP40126 519 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 ST13P50502 369 aaKnown RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 SSR4P51571 173 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 RAP1GDS1P52306 607 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 DDX39BQ13838 428 aaKnown RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 HSDL2Q6YN16 418 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 BNC2Q6ZN30 1099 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 GOLGA7Q7Z5G4 137 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 MYLK4Q86YV6 388 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 SLC34A3Q8N130 599 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 CYP4Z2PQ8N1L4 340 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 TMEM156Q8N614 296 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 WDR20Q8TBZ3 569 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 ANKRD9Q96BM1 317 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 MTERF1Q99551 399 aaKnown RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 ZNF717Q9BY31 904 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 CPSF2Q9P2I0 782 aaKnown RBP13.4□□□□□ -0.26
CLDN11-207ENST00000486975 MYOTQ9UBF9 498 aa13.4□□□□□ -0.26
CLDN11-207ENST00000486975 CROCCQ5TZA2 2017 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 A0A087WUV0 522 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 KLRC4-KLRK1H3BQV0 150 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 SAP18O00422 153 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 ASNA1O43681 348 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 PRKNO60260 465 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 LDB3O75112 727 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 SIX3O95343 332 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 CLDN9O95484 217 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 ABHD2P08910 425 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 STT3AP46977 705 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 CASP6P55212 293 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 RPS13P62277 151 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 TNFRSF17Q02223 184 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 SRSF11Q05519 484 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 SLAMF1Q13291 335 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 MRM1Q6IN84 353 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 RPTNQ6XPR3 784 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 GPR180Q86V85 440 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 SPPL2CQ8IUH8 684 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 CNPY4Q8N129 248 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 GHDCQ8N2G8 530 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 CPSF7Q8N684 471 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 PTGR2Q8N8N7 351 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 KIF18AQ8NI77 898 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 DCAKDQ8WVC6 231 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 TANKQ92844 425 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 CCDC120Q96HB5 630 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 MAGED4Q96JG8 741 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 NTMT1Q9BV86 223 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 RPF2Q9H7B2 306 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 DDX31Q9H8H2 851 aaKnown RBP13.39□□□□□ -0.27
CLDN11-207ENST00000486975 TIMMDC1Q9NPL8 285 aa13.39□□□□□ -0.27
CLDN11-207ENST00000486975 ZNF358Q9NW07 568 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms