RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 LIN28AQ9H9Z2 209 aaKnown RBP12.32□□□□□ -0.44
UBA3-210ENST00000485424 NMRAL1Q9HBL8 299 aa12.32□□□□□ -0.44
UBA3-210ENST00000485424 LYRM4Q9HD34 91 aa12.32□□□□□ -0.44
UBA3-210ENST00000485424 PTBP2Q9UKA9 531 aaKnown RBP12.32□□□□□ -0.44
UBA3-210ENST00000485424 ASB1Q9Y576 335 aa12.32□□□□□ -0.44
UBA3-210ENST00000485424 ACANP16112 2415 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 MYOCOSA0A1B0GUC4 107 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 FAM159BA6NKW6 160 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 SYCE1LA8MT33 242 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 C17orf105B2RV13 164 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 TP73O15350 636 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 RAD51CO43502 376 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 LDB3O75112 727 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 SH3BGRLO75368 114 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 PDE9AO76083 593 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 TGFB1P01137 390 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 LTA4HP09960 611 aaKnown RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 SERPINB1P30740 379 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 PLTPP55058 493 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 CBLBQ13191 982 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 DDX39BQ13838 428 aaKnown RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 TMEM35AQ53FP2 167 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 ARHGAP11AQ6P4F7 1023 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 CYS1Q717R9 158 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 MDGA2Q7Z553 956 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 CDH24Q86UP0 819 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 SLC22A16Q86VW1 577 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 ZFP62Q8NB50 900 aaPredicted RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 OR5L2Q8NGL0 311 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 C16orf52Q8NHV5 167 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 SREK1Q8WXA9 508 aaKnown RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 WDR34Q96EX3 536 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 CMTM7Q96FZ5 175 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 DGAT2Q96PD7 388 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 SPOCK3Q9BQ16 436 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 ENKD1Q9H0I2 346 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 TP63Q9H3D4 680 aaPredicted RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 PRDM7Q9NQW5 492 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 MYOTQ9UBF9 498 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 VTI1BQ9UEU0 232 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 ADGRE2Q9UHX3 823 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 ZNF223Q9UK11 482 aaPredicted RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 ZNF490Q9ULM2 529 aaPredicted RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 PPIEQ9UNP9 301 aaKnown RBP12.31□□□□□ -0.44
UBA3-210ENST00000485424 DOCK7Q96N67 2140 aa12.31□□□□□ -0.44
UBA3-210ENST00000485424 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 TGFBR3LH3BV60 316 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 K7EPI3 171 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 CYR61O00622 381 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 WISP3O95389 354 aaPredicted RBP12.3□□□□□ -0.44
UBA3-210ENST00000485424 P04436 131 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 EPB42P16452 691 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 CAPN3P20807 821 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 CRABP2P29373 138 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 TLX1P31314 330 aaPredicted RBP12.3□□□□□ -0.44
UBA3-210ENST00000485424 ARL1P40616 181 aaPredicted RBP12.3□□□□□ -0.44
UBA3-210ENST00000485424 SOX3P41225 446 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 GPR143P51810 404 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 PPIAP62937 165 aaKnown RBP12.3□□□□□ -0.44
UBA3-210ENST00000485424 TLE4Q04727 773 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 NAB1Q13506 487 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 ZKSCAN8Q15776 578 aaPredicted RBP12.3□□□□□ -0.44
UBA3-210ENST00000485424 TBCCQ15814 346 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 KBTBD12Q3ZCT8 623 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 ADNP2Q6IQ32 1131 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 OPN5Q6U736 354 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 RTL4Q6ZR62 310 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 RGS9BPQ6ZS82 235 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 GK5Q6ZS86 529 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 CEP128Q6ZU80 1094 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 VN1R5Q7Z5H4 357 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 ACOT4Q8N9L9 421 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 OR52N2Q8NGI0 321 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 ASB5Q8WWX0 329 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 ART5Q96L15 291 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 UBXN10Q96LJ8 280 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 RASL10BQ96S79 203 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 MAPKAP1Q9BPZ7 522 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 TREX2Q9BQ50 279 aaPredicted RBP12.3□□□□□ -0.44
UBA3-210ENST00000485424 MS4A8Q9BY19 250 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 MS4A12Q9NXJ0 267 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 PYCARDQ9ULZ3 195 aa12.3□□□□□ -0.44
UBA3-210ENST00000485424 FAM166BA8MTA8 275 aa12.29□□□□□ -0.44
UBA3-210ENST00000485424 UBXN8O00124 270 aa12.29□□□□□ -0.44
UBA3-210ENST00000485424 SAP18O00422 153 aaKnown RBP12.29□□□□□ -0.44
UBA3-210ENST00000485424 RTCAO00442 366 aaKnown RBP12.29□□□□□ -0.44
UBA3-210ENST00000485424 PRKNO60260 465 aaPredicted RBP12.29□□□□□ -0.44
UBA3-210ENST00000485424 KERAO60938 352 aa12.29□□□□□ -0.44
UBA3-210ENST00000485424 FAM155BO75949 473 aa12.29□□□□□ -0.44
UBA3-210ENST00000485424 OR6B1O95007 311 aa12.29□□□□□ -0.44
UBA3-210ENST00000485424 GFAPP14136 432 aa12.29□□□□□ -0.44
UBA3-210ENST00000485424 CD22P20273 847 aa12.29□□□□□ -0.44
UBA3-210ENST00000485424 HIST1H1TP22492 207 aaPredicted RBP12.29□□□□□ -0.44
UBA3-210ENST00000485424 ATP5A1P25705 553 aaKnown RBP12.29□□□□□ -0.44
UBA3-210ENST00000485424 BUD31P41223 144 aaPredicted RBP12.29□□□□□ -0.44
UBA3-210ENST00000485424 MAGEA4P43358 317 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms