RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 Q96MT0 163 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 ZDHHC5Q9C0B5 715 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 RACGAP1Q9H0H5 632 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 KLHL3Q9UH77 587 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 MKLN1Q9UL63 735 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 ATP11BQ9Y2G3 1177 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 SNX8Q9Y5X2 465 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 VEGFDO43915 354 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 CISD3P0C7P0 127 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 ITGB7P26010 798 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 SNRPGP62308 76 aaKnown RBP18.75■□□□□ 0.59
LIMS2-215ENST00000484252 CYP4F2P78329 520 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 DPTQ07507 201 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 UCK2Q9BZX2 261 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 RNF208Q9H0X6 261 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 RHBGQ9H310 441 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 NEUROD4Q9HD90 331 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 FZD3Q9NPG1 666 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 MGAT4BQ9UQ53 548 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 IRAK3Q9Y616 596 aa18.75■□□□□ 0.59
LIMS2-215ENST00000484252 M0R129 80 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 HAT1O14929 419 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 OSMP13725 252 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 SLC13A2Q13183 592 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 PUM1Q14671 1186 aaKnown RBP eCLIP18.74■□□□□ 0.59
LIMS2-215ENST00000484252 MED22Q15528 200 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 MEDAGQ5VYS4 303 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 ZNF547Q8IVP9 402 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 ZNF366Q8N895 744 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 LMNTD1Q8N9Z9 388 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 TXNDC15Q96J42 360 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 NDOR1Q9UHB4 597 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 DOCK6Q96HP0 2047 aa18.74■□□□□ 0.59
LIMS2-215ENST00000484252 LOC110117498-PIK3R3F6TDL0 507 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 K7ESM1 405 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 CLTBP09497 229 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 MAPK12P53778 367 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 RHAGQ02094 409 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 ILKQ13418 452 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 DHCR24Q15392 516 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 TSTQ16762 297 aaKnown RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 ATCAYQ86WG3 371 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 WDR36Q8NI36 951 aaKnown RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 SLC38A5Q8WUX1 472 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 PIK3R3Q92569 461 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 DHRS1Q96LJ7 313 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 QRFPRQ96P65 431 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 TRNT1Q96Q11 434 aaKnown RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 OR5M11Q96RB7 305 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 PELI2Q9HAT8 420 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 SLC25A19Q9HC21 320 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 MOV10Q9HCE1 1003 aaKnown RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 RHCGQ9UBD6 479 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 SLC6A14Q9UN76 642 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 ALPK3Q96L96 1907 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 ANKDD1BA6NHY2 528 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 TLR4O00206 839 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 FAAHO00519 579 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 FFAR1O14842 300 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 PDPK1O15530 556 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 KIAA0513O60268 411 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 CXCR2P25025 360 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 GSTM5P46439 218 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 LIM2P55344 173 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 SMIM11AP58511 58 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 CNTN1Q12860 1018 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 RPA4Q13156 261 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 NFE2L1Q14494 772 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 HEPACAMQ14CZ8 416 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 SOWAHCQ53LP3 525 aaPredicted RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 SPANXN2Q5MJ10 180 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 TMEM201Q5SNT2 666 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 KHDRBS2Q5VWX1 349 aaKnown RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 MMP21Q8N119 569 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 HORMAD2Q8N7B1 307 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 TMIEQ8NEW7 156 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 RASSF5Q8WWW0 418 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 TEFMQ96QE5 360 aaKnown RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 TAPBPLQ9BX59 468 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 SORBS1Q9BX66 1292 aaKnown RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 OR52A5Q9H2C5 316 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 RNF167Q9H6Y7 350 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 PRDM8Q9NQV8 689 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 CRNNQ9UBG3 495 aaPredicted RBP18.73■□□□□ 0.59
LIMS2-215ENST00000484252 ASF1AQ9Y294 204 aa18.73■□□□□ 0.59
LIMS2-215ENST00000484252 PLPP1O14494 284 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 LZTS3O60299 673 aaPredicted RBP18.72■□□□□ 0.59
LIMS2-215ENST00000484252 MMP20O60882 483 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 MFN2O95140 757 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 DLGAP3O95886 979 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 BCHEP06276 602 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 LINC00271P0C7V0 271 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 CCL5P13501 91 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 C6P13671 934 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 POU1F1P28069 291 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 CSTF2P33240 577 aaKnown RBP eCLIP18.72■□□□□ 0.59
LIMS2-215ENST00000484252 CRISP3P54108 245 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 MANFP55145 182 aaKnown RBP18.72■□□□□ 0.59
LIMS2-215ENST00000484252 DEFA1P59665 94 aa18.72■□□□□ 0.59
LIMS2-215ENST00000484252 DEFA3P59666 94 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 213.1 ms