RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CCDC77Q9BR77 488 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 SLC17A9Q9BYT1 436 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 SIX2Q9NPC8 291 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 OLAHQ9NV23 265 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 HAO2Q9NYQ3 351 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 FOXJ2Q9P0K8 574 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 VPS18Q9P253 973 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 APOBEC3BQ9UH17 382 aaKnown RBP6.25□□□□□ -1.41
CLK1-212ENST00000482590 RAB21Q9UL25 225 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 RAI2Q9Y5P3 530 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 NOX1Q9Y5S8 564 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 MYO18BQ8IUG5 2567 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 PIEZO2Q9H5I5 2752 aa6.25□□□□□ -1.41
CLK1-212ENST00000482590 ZNF106Q9H2Y7 1883 aaKnown RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 SPTY2D1-AS1A0A0U1RR47 76 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 LRRC3CA6NJW4 275 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 LRRC53A6NM62 1247 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 I6L893 689 aaPredicted RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 SOCS6O14544 535 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 HAUS5O94927 633 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 LSM8O95777 96 aaKnown RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 IGSF6O95976 241 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 GSRP00390 522 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 CSF2P04141 144 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 KRT6BP04259 564 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 UGT2B4P06133 528 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 TPM1P09493 284 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 GIMD1P0DJR0 217 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 RAP2AP10114 183 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 CTPS1P17812 591 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 ITGB6P18564 788 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 ITIH1P19827 911 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 CDH3P22223 829 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 RBL1P28749 1068 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 RBMS1P29558 406 aaKnown RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 HSD17B2P37059 387 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 GABRB2P47870 512 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 KRT6CP48668 564 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 KRTAP10-9P60411 292 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 ERVPABLB-1P60509 514 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 CFHR1Q03591 330 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 OCA2Q04671 838 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 RAD51Q06609 339 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 SLC20A2Q08357 652 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 FZD2Q14332 565 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 DRAP1Q14919 205 aaPredicted RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 TAZQ16635 292 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 CDKN3Q16667 212 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 ISXQ2M1V0 245 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 DEFB133Q30KQ1 61 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 ZSCAN23Q3MJ62 389 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 KRT71Q3SY84 523 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 GLE1Q53GS7 698 aaKnown RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 C2CD6Q53TS8 623 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 HSP90AA4PQ58FG1 418 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 SH2D4BQ5SQS7 431 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 FAM91A1Q658Y4 838 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 SLC9A4Q6AI14 798 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 RBM44Q6ZP01 1051 aaKnown RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 CFAP77Q6ZQR2 320 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 TAS2R42Q7RTR8 314 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 SPATA21Q7Z572 469 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 VASH2Q86V25 355 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 TIGD4Q8IY51 512 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 FAM71AQ8IYT1 594 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 ZNF683Q8IZ20 524 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 RBFAQ8N0V3 343 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 MLKLQ8NB16 471 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 C11orf65Q8NCR3 313 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 OR2AP1Q8NGE2 309 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 OR6K2Q8NGY2 324 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 DNAJB14Q8TBM8 379 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 LMX1AQ8TE12 382 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 CXorf40AQ8TE69 158 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 NSMCE1Q8WV22 266 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 GLMPQ8WWB7 406 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 NT5C3BQ969T7 300 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 VCPIP1Q96JH7 1222 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 BMFQ96LC9 184 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 SPATA13Q96N96 652 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 SLC46A1Q96NT5 459 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 HAPLN3Q96S86 360 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 TUBGCP2Q9BSJ2 902 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 C1QTNF7Q9BXJ2 289 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 POLR1EQ9GZS1 481 aaKnown RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 PLK3Q9H4B4 646 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 YY1AP1Q9H869 796 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 IL1RAPL1Q9NZN1 696 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 PEMTQ9UBM1 199 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 TRMT6Q9UJA5 497 aaKnown RBP6.24□□□□□ -1.41
CLK1-212ENST00000482590 PLAGL1Q9UM63 463 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 SATB2Q9UPW6 733 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 FADS3Q9Y5Q0 445 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 CSNK1G3Q9Y6M4 447 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 U3KQV3 271 aa6.24□□□□□ -1.41
CLK1-212ENST00000482590 AHCTF1Q8WYP5 2266 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 TRBV2A0A0J9YWF9 115 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 CXorf51AA0A1B0GTR3 108 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ELOVL7A1L3X0 281 aa6.23□□□□□ -1.41
CLK1-212ENST00000482590 ZSCAN5BA6NJL1 495 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms