RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 NBPF19A0A087WUL8 3843 aa21.15■□□□□ 0.98
CYTH3-208ENST00000482460 TMEM200CA6NKL6 621 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 NPIPA5E9PKD4 350 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 TNNI3P19429 210 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 CA7P43166 264 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 SSR4P51571 173 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 SIAH3Q8IW03 269 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 CYP4Z2PQ8N1L4 340 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 ZCCHC7Q8N3Z6 543 aaKnown RBP21.14■□□□□ 0.97
CYTH3-208ENST00000482460 WDR20Q8TBZ3 569 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 NOL11Q9H8H0 719 aaKnown RBP21.14■□□□□ 0.97
CYTH3-208ENST00000482460 PHF11Q9UIL8 331 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 NPIPA1Q9UND3 350 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 GTF3C1Q12789 2109 aa21.14■□□□□ 0.97
CYTH3-208ENST00000482460 C17orf105B2RV13 164 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 TRIM49D1C9J1S8 452 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 STX16-NPEPL1H3BU86 382 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 FOXE1O00358 373 aaPredicted RBP21.13■□□□□ 0.97
CYTH3-208ENST00000482460 STX16O14662 325 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 ASNA1O43681 348 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 SLC19A2O60779 497 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 CLDN9O95484 217 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 TLX1P31314 330 aaPredicted RBP21.13■□□□□ 0.97
CYTH3-208ENST00000482460 IGLV3-21P80748 117 aaPredicted RBP21.13■□□□□ 0.97
CYTH3-208ENST00000482460 BIKQ13323 160 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 CUL3Q13618 768 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 HSDL2Q6YN16 418 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 GPR180Q86V85 440 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 CPSF7Q8N684 471 aaKnown RBP21.13■□□□□ 0.97
CYTH3-208ENST00000482460 ATP6V1E2Q96A05 226 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 NTMT1Q9BV86 223 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 OR8D2Q9GZM6 311 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 TSPAN10Q9H1Z9 355 aaPredicted RBP21.13■□□□□ 0.97
CYTH3-208ENST00000482460 RPF2Q9H7B2 306 aaKnown RBP21.13■□□□□ 0.97
CYTH3-208ENST00000482460 LIN28AQ9H9Z2 209 aaKnown RBP21.13■□□□□ 0.97
CYTH3-208ENST00000482460 MYOTQ9UBF9 498 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 XPR1Q9UBH6 696 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 NFU1Q9UMS0 254 aa21.13■□□□□ 0.97
CYTH3-208ENST00000482460 KLRC4-KLRK1H3BQV0 150 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 CCL21O00585 134 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 OR7A17O14581 309 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 FGF17O60258 216 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 SMIM24O75264 130 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 SNRPAP09012 282 aaKnown RBP21.12■□□□□ 0.97
CYTH3-208ENST00000482460 CASP6P55212 293 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 ID2Q02363 134 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 IFT20Q8IY31 132 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 POGLUT1Q8NBL1 392 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 OR8K3Q8NH51 312 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 SLC2A12Q8TD20 617 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 TANKQ92844 425 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 MRPL57Q9BQC6 102 aaKnown RBP21.12■□□□□ 0.97
CYTH3-208ENST00000482460 ZNF717Q9BY31 904 aaPredicted RBP21.12■□□□□ 0.97
CYTH3-208ENST00000482460 SUCOQ9UBS9 1254 aaKnown RBP21.12■□□□□ 0.97
CYTH3-208ENST00000482460 PCTPQ9UKL6 214 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 PPT2Q9UMR5 302 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 ZNF835Q9Y2P0 537 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 ATG4BQ9Y4P1 393 aa21.12■□□□□ 0.97
CYTH3-208ENST00000482460 EXOC1LA0A1B0GW35 172 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 PROM1O43490 865 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 OR2J2O76002 312 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 ABHD2P08910 425 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 COX7A2P14406 83 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 ZNF24P17028 368 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 BSGP35613 385 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 ARL1P40616 181 aaPredicted RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 STT3AP46977 705 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 MEOX1P50221 254 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 NEK2P51955 445 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 CCNG1P51959 295 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 HNRNPH2P55795 449 aaKnown RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 TNFRSF17Q02223 184 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 RNFT1Q5M7Z0 435 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 LGSNQ5TDP6 509 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 C18orf63Q68DL7 685 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 MRM1Q6IN84 353 aaKnown RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 MTFR2Q6P444 385 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 C16orf47Q6ZP98 133 aaPredicted RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 Q6ZPB1 254 aaPredicted RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 MDGA2Q7Z553 956 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 SPPL2CQ8IUH8 684 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 SULF2Q8IWU5 870 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 OR4N5Q8IXE1 308 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 GPALPP1Q8IXQ4 340 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 ZNF321PQ8N8H1 164 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 OR52B6Q8NGF0 335 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 MAGED4Q96JG8 741 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 CDK15Q96Q40 435 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 MRPL46Q9H2W6 279 aaKnown RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 DDX31Q9H8H2 851 aaKnown RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 ZBTB26Q9HCK0 441 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 LYARQ9NX58 379 aaKnown RBP21.11■□□□□ 0.97
CYTH3-208ENST00000482460 UNC79Q9P2D8 2635 aa21.11■□□□□ 0.97
CYTH3-208ENST00000482460 CACNA1DQ01668 2161 aa21.1■□□□□ 0.97
CYTH3-208ENST00000482460 A8MVJ9 347 aa21.1■□□□□ 0.97
CYTH3-208ENST00000482460 PEX1O43933 1283 aa21.1■□□□□ 0.97
CYTH3-208ENST00000482460 EEDO75530 441 aaKnown RBP21.1■□□□□ 0.97
CYTH3-208ENST00000482460 ETHE1O95571 254 aa21.1■□□□□ 0.97
CYTH3-208ENST00000482460 DCTP40126 519 aa21.1■□□□□ 0.97
CYTH3-208ENST00000482460 BUD31P41223 144 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms