RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CROTQ9UKG9 612 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 UTS2RQ9UKP6 389 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 FBXW2Q9UKT8 454 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 CES1P1Q9UKY3 287 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 EXO1Q9UQ84 846 aaKnown RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 CLCA2Q9UQC9 943 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 ENTPD4Q9Y227 616 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 ATG4BQ9Y4P1 393 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 MMACHCQ9Y4U1 282 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 ZNF780BQ9Y6R6 833 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 IGLV3-12A0A075B6K2 115 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 A0A0A6YYC8 382 aaPredicted RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 A0A0G2JN53 185 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 A0A1W2PRB8 838 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 ERICH4A6NGS2 130 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 I3L1I5 382 aaPredicted RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 CYR61O00622 381 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 RFXANKO14593 260 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 AIM2O14862 343 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 PCDH17O14917 1159 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 CHST10O43529 356 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 AKAP10O43572 662 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 SCRG1O75711 98 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 DNAJC8O75937 253 aaPredicted RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 SOX30O94993 753 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 LRATO95237 230 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 ALBP02768 609 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 LAMP1P11279 417 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 CSNK2A2P19784 350 aaPredicted RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 AGXTP21549 392 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 GALNSP34059 522 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 RORAP35398 523 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 CPOXP36551 454 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 ALDH9A1P49189 494 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 MAPK10P53779 464 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 WNT3P56703 355 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 PCBP4P57723 403 aaKnown RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 NCALDP61601 193 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 DCDP81605 110 aaKnown RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 ABHD18Q0P651 414 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 SERTAD2Q14140 314 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 C16orf72Q14CZ0 275 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 DCAF12Q5T6F0 453 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 OR4F3Q6IEY1 312 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 C8orf82Q6P1X6 216 aaPredicted RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 BHLHB9Q6PI77 547 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 TTLL10Q6ZVT0 673 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 RAB11FIP2Q7L804 512 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 GALNT15Q8N3T1 639 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 OR7A2PQ8NGA2 310 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 WDR36Q8NI36 951 aaKnown RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 GFM2Q969S9 779 aaKnown RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 VPS33AQ96AX1 596 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 FKBP10Q96AY3 582 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 TBC1D20Q96BZ9 403 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 ZNF578Q96N58 590 aaPredicted RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 GBP5Q96PP8 586 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 PANX1Q96RD7 426 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 SLC24A3Q9HC58 644 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 SPAG4Q9NPE6 437 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 STARD5Q9NSY2 213 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 TEX10Q9NXF1 929 aaPredicted RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 SLC39A1Q9NY26 324 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 TAS2R9Q9NYW1 312 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 MAP10Q9P2G4 905 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 NXT1Q9UKK6 140 aaKnown RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 MRPS2Q9Y399 296 aaKnown RBP9.59□□□□□ -0.87
USP39-215ENST00000481409 PCDHGA3Q9Y5H0 932 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 USP34Q70CQ2 3546 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 LAMA1P25391 3075 aa9.59□□□□□ -0.87
USP39-215ENST00000481409 PCNX2A6NKB5 2137 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 ASPDHA6ND91 283 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 MYO1GB0I1T2 1018 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 SGK494L7N484 410 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 CTNSO60931 367 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 CSO75390 466 aaKnown RBP9.58□□□□□ -0.88
USP39-215ENST00000481409 RDH16O75452 317 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 ANP32DO95626 131 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 GPR75O95800 540 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 STATHP02808 62 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 KLK3P07288 261 aaPredicted RBP9.58□□□□□ -0.88
USP39-215ENST00000481409 FTH1P19P0C7X4 201 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 FBLP22087 321 aaKnown RBP9.58□□□□□ -0.88
USP39-215ENST00000481409 ALAS2P22557 587 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 DGKQP52824 942 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 MANFP55145 182 aaKnown RBP9.58□□□□□ -0.88
USP39-215ENST00000481409 PHC1P78364 1004 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 MC1RQ01726 317 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 VAC14Q08AM6 782 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 MAP7Q14244 749 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 SAMD4BQ5PRF9 694 aaKnown RBP9.58□□□□□ -0.88
USP39-215ENST00000481409 C6orf10Q5SRN2 563 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 PWWP2BQ6NUJ5 590 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 TMEM64Q6YI46 380 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 QSOX2Q6ZRP7 698 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 RINLQ6ZS11 566 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 B3GNT8Q7Z7M8 397 aa9.58□□□□□ -0.88
USP39-215ENST00000481409 DHDDSQ86SQ9 333 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms