RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 DNAJB9Q9UBS3 223 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF639Q9UID6 485 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ENTPD4Q9Y227 616 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 ATG4BQ9Y4P1 393 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 SPACA6W5XKT8 324 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 UNC80Q8N2C7 3258 aa10.43□□□□□ -0.74
VTI1A-204ENST00000480057 TP53BP1Q12888 1972 aaPredicted RBP10.43□□□□□ -0.74
VTI1A-204ENST00000480057 TMEM131Q92545 1883 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 TNRC6BQ9UPQ9 1833 aaKnown RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 A0A0G2JN53 185 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 BLACEA4D250 179 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 TLCD2A6NGC4 264 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 RHPN2P1A8MT19 583 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 DENRO43583 198 aaKnown RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 DPM1O60762 260 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 PRKD3O94806 890 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 SLITRK5O94991 958 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 SERPINA1P01009 418 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 IFNA14P01570 189 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 ARAFP10398 606 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 PVRP15151 417 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 ST6GAL1P15907 406 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 TYRP1P17643 537 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 CSNK2A2P19784 350 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 TLX1P31314 330 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 MPIP34949 423 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 CNR2P34972 360 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 HOXD12P35452 270 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 CRATP43155 626 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 GPR3P46089 330 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 EMP3P54852 163 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 EEF1A2Q05639 463 aaKnown RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 LRRC36Q1X8D7 754 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 DEFB133Q30KQ1 61 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 PEAR1Q5VY43 1037 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 FRMPD2BQ6IN97 320 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 SPRED1Q7Z699 444 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 AMIGO2Q86SJ2 522 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 DNAJC22Q8N4W6 341 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 FBXO30Q8TB52 745 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 ZDHHC12Q96GR4 267 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 FCRL4Q96PJ5 515 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 NR1H4Q96RI1 486 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 BBS4Q96RK4 519 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 ELF4Q99607 663 aaPredicted RBP10.42□□□□□ -0.74
VTI1A-204ENST00000480057 SEPHS2Q99611 448 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 MAPKAP1Q9BPZ7 522 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 MACROD1Q9BQ69 325 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 CCDC3Q9BQI4 270 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 GLIPR2Q9H4G4 154 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 COQ10BQ9H8M1 238 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 A4GALTQ9NPC4 353 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 CD320Q9NPF0 282 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 GPATCH2Q9NW75 528 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 ADPRHL2Q9NX46 363 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 KCMF1Q9P0J7 381 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 FBXO4Q9UKT5 387 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 FBXW2Q9UKT8 454 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 ANGPT4Q9Y264 503 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF780BQ9Y6R6 833 aa10.42□□□□□ -0.74
VTI1A-204ENST00000480057 LOC105369274A0A096LPK9 316 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 LOC102723532A0A0G2JNH3 316 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 A0A1B0GVT2 93 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 GALR3O60755 368 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 RASAL1O95294 804 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 SEMG1P04279 462 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 NTRK1P04629 796 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PNLIPP16233 465 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 GLB1P16278 677 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 CPN2P22792 545 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 SOX11P35716 441 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 DHPSP49366 369 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 CCT3P49368 545 aaKnown RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PRIM2P49643 509 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 NCBP2P52298 156 aaKnown RBP eCLIP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 LIM2P55344 173 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PCBP3P57721 371 aaKnown RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 DSTNP60981 165 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 GPLD1P80108 840 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 SCARB2Q14108 478 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 SPIDRQ14159 915 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 MYBPC3Q14896 1274 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 NDUFA9Q16795 377 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PRTGQ2VWP7 1150 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 SPDYE7PQ495Y7 208 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 CRB2Q5IJ48 1285 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 GARNL3Q5VVW2 1013 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 ENPP6Q6UWR7 440 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 ZBTB49Q6ZSB9 765 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PIWIL3Q7Z3Z3 882 aaKnown RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 RABEPKQ7Z6M1 372 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 PATL1Q86TB9 770 aaKnown RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 ZNF761Q86XN6 746 aaPredicted RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 RNF130Q86XS8 419 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 MCATQ8IVS2 390 aaKnown RBP10.41□□□□□ -0.74
VTI1A-204ENST00000480057 C1orf210Q8IVY1 113 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 OR4N4Q8N0Y3 316 aa10.41□□□□□ -0.74
VTI1A-204ENST00000480057 SVOPLQ8N434 492 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms