RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 METTL4Q8N3J2 472 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 ZCCHC7Q8N3Z6 543 aaKnown RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 SIRT6Q8N6T7 355 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 GOLGA6L1Q8N7Z2 621 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 PLPP5Q8NEB5 264 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 CDC26Q8NHZ8 85 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 ARL8AQ96BM9 186 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 WBP1Q96G27 269 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 LPAR4Q99677 370 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 TRMOQ9BU70 441 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 TUBB6Q9BUF5 446 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 EBPLQ9BY08 206 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 LHPPQ9H008 270 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 SLC25A18Q9H1K4 315 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 DDX31Q9H8H2 851 aaKnown RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 EML4Q9HC35 981 aaKnown RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 NMRK1Q9NWW6 199 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 LYARQ9NX58 379 aaKnown RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 TEX10Q9NXF1 929 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-215ENST00000478531 KCMF1Q9P0J7 381 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 PHF11Q9UIL8 331 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 TUBD1Q9UJT1 453 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 ATG4BQ9Y4P1 393 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 MMACHCQ9Y4U1 282 aa6.47□□□□□ -1.37
BRCA1-215ENST00000478531 IGKV3D-11A0A0A0MRZ8 115 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 GNG14A0A1W2PPG7 69 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 TCRBV16S1A1N1A0A5B0 115 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 PCDH7O60245 1069 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 FGF17O60258 216 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 SKAP2O75563 359 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 MYO1DO94832 1006 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 HSPA4LO95757 839 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 AIFM1O95831 613 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 CHEK2O96017 543 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 ALPPP05187 535 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 ITGAMP11215 1152 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 SFTPCP11686 197 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 BGNP21810 368 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 TPP2P29144 1249 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 ARRB2P32121 409 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 ARFIP1P53367 373 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 HSD17B7P56937 341 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 ACSM2AQ08AH3 577 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 TBL3Q12788 808 aaKnown RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 MYBPC3Q14896 1274 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 VWA5B1Q5TIE3 1220 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 KANK2Q63ZY3 851 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 ACSM2BQ68CK6 577 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 OR4N5Q8IXE1 308 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 DDIASQ8IXT1 998 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 GBP7Q8N8V2 638 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 BRIX1Q8TDN6 353 aaKnown RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 TLCD1Q96CP7 247 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 APIPQ96GX9 242 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 WDR77Q9BQA1 342 aaPredicted RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 RPF2Q9H7B2 306 aaKnown RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 WDR41Q9HAD4 459 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 MS4A12Q9NXJ0 267 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 PSD3Q9NYI0 1048 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 NKIRAS1Q9NYS0 192 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 PTGFRNQ9P2B2 879 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 ASB4Q9Y574 426 aa6.46□□□□□ -1.37
BRCA1-215ENST00000478531 PCDHGA9Q9Y5G4 932 aaKnown RBP6.46□□□□□ -1.37
BRCA1-215ENST00000478531 UBR5O95071 2799 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-215ENST00000478531 UQCRHLA0A096LP55 91 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 A0A1W2PQ72 361 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 A0A1W2PR48 441 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 SAGE2PA6NJ88 616 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 A8MUI8 341 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 H3BQF6 201 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 BIRC5O15392 142 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 PROM1O43490 865 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 CEACAM4O75871 244 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 SERPINA7P05543 415 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 LINC00032P0C843 101 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 ALDH9A1P49189 494 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 FOLH1Q04609 750 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 SPIN4Q56A73 249 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 TTMPQ5BVD1 217 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 NDUFAF5Q5TEU4 345 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 AGBL2Q5U5Z8 902 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 AGAP7PQ5VUJ5 663 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 CES4AQ5XG92 561 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 FCRLBQ6BAA4 426 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 PLAG1Q6DJT9 500 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 MRM1Q6IN84 353 aaKnown RBP6.46□□□□□ -1.38
BRCA1-215ENST00000478531 TCTN3Q6NUS6 607 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 LINC00696Q6ZRV3 163 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 RIPOR1Q6ZS17 1223 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 MMP21Q8N119 569 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 KIF2BQ8N4N8 673 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 LSM14AQ8ND56 463 aaKnown RBP6.46□□□□□ -1.38
BRCA1-215ENST00000478531 TWIST2Q8WVJ9 160 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 UCN3Q969E3 161 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 AGAP4Q96P64 663 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 ALOXE3Q9BYJ1 711 aa6.46□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-215ENST00000478531 ZNF395Q9H8N7 513 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-215ENST00000478531 ZBTB20Q9HC78 741 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-215ENST00000478531 C5AR2Q9P296 337 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms