RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 HDDC3Q8N4P3 179 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 POC5Q8NA72 575 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 MRPL38Q96DV4 380 aaKnown RBP16.43■□□□□ 0.22
LINC00336-201ENST00000477984 IL17FQ96PD4 163 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 BHLHE41Q9C0J9 482 aaPredicted RBP16.43■□□□□ 0.22
LINC00336-201ENST00000477984 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 SPNS1Q9H2V7 528 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 POLE4Q9NR33 117 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 PCDHGA2Q9Y5H1 932 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 LYVE1Q9Y5Y7 322 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 RNASET2O00584 256 aaKnown RBP16.43■□□□□ 0.22
LINC00336-201ENST00000477984 KMOO15229 486 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 DYRK3O43781 588 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 TGFBR1P36897 503 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 SLC19A1P41440 591 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 SLC13A2Q13183 592 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 SYT16Q17RD7 645 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 LRIT3Q3SXY7 679 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 C2orf27AQ580R0 203 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 COLEC12Q5KU26 742 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 PARM1Q6UWI2 310 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 PRR23CQ6ZRP0 262 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 GALNT6Q8NCL4 622 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 OR4C15Q8NGM1 316 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 OR5K2Q8NHB8 316 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 ZNF675Q8TD23 568 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 REEP4Q9H6H4 257 aa16.43■□□□□ 0.22
LINC00336-201ENST00000477984 PNMA8BQ9ULN7 279 aaPredicted RBP16.43■□□□□ 0.22
LINC00336-201ENST00000477984 EXO1Q9UQ84 846 aaKnown RBP16.43■□□□□ 0.22
LINC00336-201ENST00000477984 RGS13O14921 159 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 TBX1O43435 398 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 MED26O95402 600 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 C1QCP02747 245 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 TNFRSF4P43489 277 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 TSEN54Q7Z6J9 526 aaKnown RBP16.42■□□□□ 0.22
LINC00336-201ENST00000477984 FAM129CQ86XR2 697 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 METTL4Q8N3J2 472 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 MYOCQ99972 504 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 MBNL1Q9NR56 388 aaKnown RBP16.42■□□□□ 0.22
LINC00336-201ENST00000477984 THSD1Q9NS62 852 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 PLAGL1Q9UM63 463 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 LOC110117498-PIK3R3F6TDL0 507 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 ASNA1O43681 348 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 TGFB1P01137 390 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 LAMP2P13473 410 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 RRM2P31350 389 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 TRIM23P36406 574 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 RPL3P39023 403 aaKnown RBP16.42■□□□□ 0.22
LINC00336-201ENST00000477984 UGT2B15P54855 530 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 SELENOWP63302 87 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC00336-201ENST00000477984 PDE7AQ13946 482 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 ATAT1Q5SQI0 421 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 ZNF367Q7RTV3 350 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 CACUL1Q86Y37 369 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 KRT78Q8N1N4 520 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 PARP16Q8N5Y8 322 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 PIK3R3Q92569 461 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 FGF14Q92915 247 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 TRMT61BQ9BVS5 477 aaKnown RBP16.42■□□□□ 0.22
LINC00336-201ENST00000477984 MYNNQ9NPC7 610 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 TM7SF3Q9NS93 570 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 SPATA7Q9P0W8 599 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 ZNF282Q9UDV7 671 aaPredicted RBP16.42■□□□□ 0.22
LINC00336-201ENST00000477984 SERGEFQ9UGK8 458 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 ENOPH1Q9UHY7 261 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 FZD4Q9ULV1 537 aa16.42■□□□□ 0.22
LINC00336-201ENST00000477984 A0A1W2PP55 124 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 TNFRSF11BO00300 401 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 ADORA3P0DMS8 318 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 C21orf33P30042 268 aaPredicted RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 DEFA1P59665 94 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 DEFA3P59666 94 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 MEF2AQ02078 507 aaPredicted RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 IRF4Q15306 451 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 RGNQ15493 299 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 ZNF362Q5T0B9 420 aaPredicted RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 ZNF776Q68DI1 518 aaPredicted RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 TMIGD1Q6UXZ0 262 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 TP53I13Q8NBR0 393 aaPredicted RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 C11orf65Q8NCR3 313 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 GOT1L1Q8NHS2 421 aaPredicted RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 CCDC32Q9BV29 185 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 CDCA4Q9BXL8 241 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 OR51B5Q9H339 312 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 WDR26Q9H7D7 661 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 PELI2Q9HAT8 420 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 CNOT2Q9NZN8 540 aaKnown RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 SH3BP4Q9P0V3 963 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 VPS4AQ9UN37 437 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 ZFR2Q9UPR6 939 aaKnown RBP16.41■□□□□ 0.22
LINC00336-201ENST00000477984 TRAPPC4Q9Y296 219 aa16.41■□□□□ 0.22
LINC00336-201ENST00000477984 A0A075B6Q4 140 aa16.4■□□□□ 0.22
LINC00336-201ENST00000477984 SH3D21A4FU49 640 aa16.4■□□□□ 0.22
LINC00336-201ENST00000477984 KIR2DL1P43626 348 aaPredicted RBP16.4■□□□□ 0.22
LINC00336-201ENST00000477984 RGS6P49758 472 aa16.4■□□□□ 0.22
LINC00336-201ENST00000477984 DMPKQ09013 629 aa16.4■□□□□ 0.22
LINC00336-201ENST00000477984 RBBP4Q09028 425 aa16.4■□□□□ 0.22
LINC00336-201ENST00000477984 TIMM50Q3ZCQ8 353 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms