RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SIK2Q9H0K1 926 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 SLAMF7Q9NQ25 335 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 MARCH5Q9NX47 278 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 GTSE1Q9NYZ3 720 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 MYO16Q9Y6X6 1858 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 MYO18AQ92614 2054 aaKnown RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 TET1Q8NFU7 2136 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 VWA8A3KMH1 1905 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 FAM234BA2RU67 622 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 INMT-MINDY4F8WBC2 141 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 PPP6CO00743 305 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 GLUD1P00367 558 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 HOXB6P17509 224 aaKnown RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 TPH1P17752 444 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 STOMP27105 288 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 YWHAQP27348 245 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 GATMP50440 423 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CCL23P55773 120 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 ECH1Q13011 328 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CDNFQ49AH0 187 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 TCEAL6Q6IPX3 200 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 DDX53Q86TM3 631 aaKnown RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF567Q8N184 647 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CRIPAKQ8N1N5 446 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 NANOGP1Q8N7R0 232 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF461Q8TAF7 563 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 UPRTQ96BW1 309 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 CYP2S1Q96SQ9 504 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 SLC28A3Q9HAS3 691 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 LTB4R2Q9NPC1 389 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 PPP4R1LQ9P1A2 415 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 ASH2LQ9UBL3 628 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 NCKAP1Q9Y2A7 1128 aa12.12□□□□□ -0.47
RTFDC1-207ENST00000477573 A0A1B0GW55 424 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 ERI2A8K979 691 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 A8MVJ9 347 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 MT-ND1P03886 318 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DUX4L2P0CJ85 424 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DUX4L3P0CJ86 424 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DUX4L4P0CJ87 422 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DUX4L5P0CJ88 424 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DUX4L6P0CJ89 424 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DUX4L7P0CJ90 424 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 SPP1P10451 314 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 CYP4B1P13584 511 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 GRK5P34947 590 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 KCNJ3P48549 501 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 RPL6Q02878 288 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 UAP1L1Q3KQV9 507 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 KRBOX4Q5JUW0 171 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 CD276Q5ZPR3 534 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 C19orf48Q6RUI8 117 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 NLRC3Q7RTR2 1065 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DPPA2Q7Z7J5 298 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 SKA3Q8IX90 412 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 PLD6Q8N2A8 252 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 C19orf18Q8NEA5 215 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 OR5K1Q8NHB7 308 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 TSPEARQ8WU66 669 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 ADAMTS14Q8WXS8 1223 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 FBXO32Q969P5 355 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 RAD9AQ99638 391 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 EVA1AQ9H8M9 152 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 C11orf16Q9NQ32 467 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 TLR8Q9NR97 1041 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DUX4Q9UBX2 424 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 PCDHGB7Q9Y5F8 929 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 MAGED1Q9Y5V3 778 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 D6RAR5 112 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 LGALS8O00214 317 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 ATG12O94817 140 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 HOXC4P09017 264 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 NDUFB7P17568 137 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 PTPN3P26045 913 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 PSMB4P28070 264 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 RGS6P49758 472 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 NAGLUP54802 743 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 MAZP56270 477 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 POU4F1Q01851 419 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 NRG1Q02297 640 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 C2orf80Q0P641 193 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 KLHL22Q53GT1 634 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 HAGHLQ6PII5 290 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 SEZ6L2Q6UXD5 910 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 C3P1Q6ZMU1 363 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 TRMT11Q7Z4G4 463 aaKnown RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 FUNDC1Q8IVP5 155 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 DENND6AQ8IWF6 608 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 ZNF655Q8N720 491 aaPredicted RBP12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 UCN3Q969E3 161 aa12.11□□□□□ -0.47
RTFDC1-207ENST00000477573 FCRL2Q96LA5 508 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms