RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PIWIL4Q7Z3Z4 852 aaKnown RBP6.79□□□□□ -1.32
BRCA1-214ENST00000477152 VN1R4Q7Z5H5 301 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-214ENST00000477152 GALNT7Q86SF2 657 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 CAND1Q86VP6 1230 aaKnown RBP6.79□□□□□ -1.32
BRCA1-214ENST00000477152 DENND6AQ8IWF6 608 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 ABHD11Q8NFV4 315 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 MYRIPQ8NFW9 859 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 NT5CQ8TCD5 201 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 SNF8Q96H20 258 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 SERPINB12Q96P63 405 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 SGPP1Q9BX95 441 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 ATG10Q9H0Y0 220 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 PELI2Q9HAT8 420 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 IARS2Q9NSE4 1012 aaKnown RBP6.79□□□□□ -1.32
BRCA1-214ENST00000477152 GALPQ9UBC7 116 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 ZFP69BQ9UJL9 534 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 ITGB1BP2Q9UKP3 347 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 PDE10AQ9Y233 779 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 KCNE2Q9Y6J6 123 aa6.79□□□□□ -1.32
BRCA1-214ENST00000477152 FEZF1A0PJY2 475 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 SAGE2PA6NJ88 616 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FAM47E-STBD1D6RA91 191 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 CHST10O43529 356 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 GALR3O60755 368 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 HAUS5O94927 633 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PRF1P14222 555 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 CD1EP15812 388 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 KRT15P19012 456 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PTGS2P35354 604 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PEX19P40855 299 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PMP22Q01453 160 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TERF2Q15554 542 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 HSP90AA5PQ58FG0 334 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FCRLBQ6BAA4 426 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FAM45BPQ6NSW5 357 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FAM45AQ8TCE6 357 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ELP5Q8TE02 316 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 EEF1AKMT1Q8WVE0 214 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 SLC5A11Q8WWX8 675 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FBXW5Q969U6 566 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FBXL8Q96CD0 374 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 LINGO1Q96FE5 620 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 LRRC46Q96FV0 321 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 SIGLEC12Q96PQ1 595 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 NPLQ9BXD5 320 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PITHD1Q9GZP4 211 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TP63Q9H3D4 680 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TRIM45Q9H8W5 580 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PPANQ9NQ55 473 aaKnown RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 C19orf73Q9NVV2 129 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TINAGQ9UJW2 476 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 JRKLQ9Y4A0 524 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 SPACA6W5XKT8 324 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 RELNP78509 3460 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 GTF3C1Q12789 2109 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 NCOA6Q14686 2063 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ZCWPW2A0A1B0GU75 182 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TCRBV7S3A2A0A539 114 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 GOLGA8MH3BSY2 632 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PGRMC1O00264 195 aaKnown RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 PSPNO60542 156 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 B4GALT2O60909 372 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 CDC123O75794 336 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 NPPBP16860 134 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 COILP38432 576 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FNTAP49354 379 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 HNMTP50135 292 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 MLF1P58340 268 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ADORA2A-AS1P86434 159 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 MVKQ03426 396 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TBL3Q12788 808 aaKnown RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 DEFB134Q4QY38 66 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 CES4AQ5XG92 561 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ARHGAP11AQ6P4F7 1023 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ZNF549Q6P9A3 640 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 MEX3BQ6ZN04 569 aaKnown RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FRA10AC1Q70Z53 315 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 CLYBLQ8N0X4 340 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 KRT78Q8N1N4 520 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TMEM132CQ8N3T6 1108 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 NKAPQ8N5F7 415 aaKnown RBP6.78□□□□□ -1.32
BRCA1-214ENST00000477152 OR4K1Q8NGD4 311 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 OR56A3Q8NH54 315 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 FAM57AQ8TBR7 257 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 AGAP11Q8TF27 550 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ANKRD7Q92527 254 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 RND1Q92730 232 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 SDCCAG3Q96C92 435 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 VMP1Q96GC9 406 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 VPS39Q96JC1 886 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 RUNDC3BQ96NL0 473 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TRIM8Q9BZR9 551 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ROGDIQ9GZN7 287 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 MCCC2Q9HCC0 563 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 ANKRD10Q9NXR5 420 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 NSMCE4AQ9NXX6 385 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 TNFRSF10DQ9UBN6 386 aa6.78□□□□□ -1.32
BRCA1-214ENST00000477152 MCM8Q9UJA3 840 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms