RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 POU4F3Q15319 338 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 MPEG1Q2M385 716 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF791Q3KP31 576 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-213ENST00000476777 PIGGQ5H8A4 983 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 SLC22A10Q63ZE4 541 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 NXPE4Q6UWF7 544 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 GSTA5Q7RTV2 222 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 LACC1Q8IV20 430 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 LMNTD2Q8IXW0 634 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 VWA5B2Q8N398 1253 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 SIMC1Q8NDZ2 872 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 OR5L2Q8NGL0 311 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 ATL1Q8WXF7 558 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 ZNF592Q92610 1267 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 FAR2Q96K12 515 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 CSF3RQ99062 836 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 ALOXE3Q9BYJ1 711 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 EPB41L4BQ9H329 900 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 PROK2Q9HC23 129 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 ZFP64Q9NPA5 681 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 C20orf96Q9NUD7 363 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-213ENST00000476777 QPCTLQ9NXS2 382 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 TAS2R13Q9NYV9 303 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 JKAMPQ9P055 326 aa10.46□□□□□ -0.73
BRCA1-213ENST00000476777 MRPS33Q9Y291 106 aaKnown RBP10.46□□□□□ -0.73
BRCA1-213ENST00000476777 ANK3Q12955 4377 aaKnown RBP10.46□□□□□ -0.74
BRCA1-213ENST00000476777 DSCAMO60469 2012 aa10.46□□□□□ -0.74
BRCA1-213ENST00000476777 LRIT2A6NDA9 550 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 SYNDIG1LA6NDD5 238 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 C17orf105B2RV13 164 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 SMAD7O15105 426 aaKnown RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 ERI3O43414 337 aaKnown RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 B3GALT2O43825 422 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 CTNSO60931 367 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 GUCA1CO95843 209 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 SAT1P21673 171 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 HNRNPH1P31943 449 aaKnown RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 TRPC1P48995 793 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 AGFG1P52594 562 aaKnown RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 CDKN2DP55273 166 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 KCNJ2P63252 427 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 CRYZQ08257 329 aaKnown RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 KIF5AQ12840 1032 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 ANKRD22Q5VYY1 191 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 NSUN5P2Q63ZY6 315 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 TMPRSS11BQ86T26 416 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 P3H2Q8IVL5 708 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 KLHDC8AQ8IYD2 350 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 LRRC75A-AS1Q8N1F1 130 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 AGGF1Q8N302 714 aaeCLIP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 SLC2A12Q8TD20 617 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 CALML6Q8TD86 181 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 PAQR8Q8TEZ7 354 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 MS4A6EQ96DS6 147 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 Q96MF0 132 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 QRFPRQ96P65 431 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 WDR83Q9BRX9 315 aaKnown RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 TRIM5Q9C035 493 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 BOKQ9UMX3 212 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 DYRK1BQ9Y463 629 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 MAD1L1Q9Y6D9 718 aa10.45□□□□□ -0.74
BRCA1-213ENST00000476777 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.742e-7■■■■■ 43.6
BRCA1-213ENST00000476777 CHD3Q12873 2000 aaKnown RBP10.45□□□□□ -0.74
BRCA1-213ENST00000476777 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 C15orf38-AP3S2A0A0A6YYH1 394 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 EEF1E1-BLOC1S5C9J1V9 151 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 EEF1E1O43324 174 aaKnown RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 SMPD2O60906 423 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 ETHE1O95571 254 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 MLNP12872 115 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 GABRB3P28472 473 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 LIM2P55344 173 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 PPP2R2BQ00005 443 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 ASPHQ12797 758 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 DUSP8Q13202 625 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 TRIP13Q15645 432 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 HSP90AA5PQ58FG0 334 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 RBM20Q5T481 1227 aaKnown RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 PRAMEF20Q5VT98 475 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 PRSS57Q6UWY2 283 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 LYPD8Q6UX82 237 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 CAPN12Q6ZSI9 719 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 THOC6Q86W42 341 aaKnown RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 MED12LQ86YW9 2145 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 LIX1Q8N485 282 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 GPATCH11Q8N954 259 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 C2CD4AQ8NCU7 369 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 ZNF721Q8TF20 911 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 SMPDL3BQ92485 455 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 SPACA9Q96E40 222 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 HSPBAP1Q96EW2 488 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 DACH2Q96NX9 599 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 TIMP4Q99727 224 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 PIP5K1AQ99755 562 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 BDH2Q9BUT1 245 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 TRIM54Q9BYV2 358 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 IARS2Q9NSE4 1012 aaKnown RBP10.44□□□□□ -0.74
BRCA1-213ENST00000476777 DAPP1Q9UN19 280 aa10.44□□□□□ -0.74
BRCA1-213ENST00000476777 SLC22A14Q9Y267 594 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms