RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TANKQ92844 425 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 ZNF700Q9H0M5 742 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 MED4Q9NPJ6 270 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 ATP13A2Q9NQ11 1180 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 NECTIN3Q9NQS3 549 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 GNG14A0A1W2PPG7 69 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 KLF11O14901 512 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 SNNO75324 88 aaPredicted RBP27.75■■■□□ 2.03
HOXB3-208ENST00000476342 SKAP2O75563 359 aaPredicted RBP27.75■■■□□ 2.03
HOXB3-208ENST00000476342 MYO1DO94832 1006 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 OR4D2P58180 307 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 STX4Q12846 297 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 CHAF1BQ13112 559 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 AIMP2Q13155 320 aaKnown RBP27.75■■■□□ 2.03
HOXB3-208ENST00000476342 Q6ZSR9 355 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 FAM76AQ8TAV0 307 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 C11orf24Q96F05 449 aaPredicted RBP27.75■■■□□ 2.03
HOXB3-208ENST00000476342 TUBB6Q9BUF5 446 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 LRTM1Q9HBL6 345 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 C1orf109Q9NX04 203 aa27.75■■■□□ 2.03
HOXB3-208ENST00000476342 TEX10Q9NXF1 929 aaPredicted RBP27.75■■■□□ 2.03
HOXB3-208ENST00000476342 CACNA1GO43497 2377 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 MED13Q9UHV7 2174 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 A0A1W2PR48 441 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 SEC22BO75396 215 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 AIFM1O95831 613 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 ACTN3Q08043 901 aaPredicted RBP27.74■■■□□ 2.03
HOXB3-208ENST00000476342 PCOLCEQ15113 449 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 SFT2D3Q587I9 215 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 CLNKQ7Z7G1 428 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 OR2T11Q8NH01 316 aa27.74■■■□□ 2.03
HOXB3-208ENST00000476342 GSTM5P46439 218 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 POLE2P56282 527 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 RAE1P78406 368 aaKnown RBP27.73■■■□□ 2.03
HOXB3-208ENST00000476342 SERTAD2Q14140 314 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 NDUFAF5Q5TEU4 345 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 LRRC8CQ8TDW0 803 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 ZNF75CPQ92670 426 aaPredicted RBP27.73■■■□□ 2.03
HOXB3-208ENST00000476342 LPAR4Q99677 370 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 FAIM2Q9BWQ8 316 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 ZNF160Q9HCG1 818 aa27.73■■■□□ 2.03
HOXB3-208ENST00000476342 LDB3O75112 727 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 ANXA4P09525 319 aaPredicted RBP27.72■■■□□ 2.03
HOXB3-208ENST00000476342 LINC00303Q3SY05 128 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 XKR7Q5GH72 579 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 OR52E8Q6IFG1 317 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 PAPD4Q6PIY7 484 aaKnown RBP27.72■■■□□ 2.03
HOXB3-208ENST00000476342 C19orf60Q96EN9 201 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 PPP3R2Q96LZ3 170 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 EBPLQ9BY08 206 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 TRIM55Q9BYV6 548 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 G3BP2Q9UN86 482 aaKnown RBP27.72■■■□□ 2.03
HOXB3-208ENST00000476342 TMED5Q9Y3A6 229 aa27.72■■■□□ 2.03
HOXB3-208ENST00000476342 NBEAQ8NFP9 2946 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 IGHV3-20A0A0C4DH32 117 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 C1orf226A1L170 272 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 DYNC1I1O14576 645 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 LSM1O15116 133 aaKnown RBP27.71■■■□□ 2.03
HOXB3-208ENST00000476342 PRKRAO75569 313 aaKnown RBP27.71■■■□□ 2.03
HOXB3-208ENST00000476342 DNAJB5O75953 348 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 SEC24DO94855 1032 aaPredicted RBP27.71■■■□□ 2.03
HOXB3-208ENST00000476342 CCL11P51671 97 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 ZNF763Q0D2J5 394 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 BIKQ13323 160 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 PDCD2Q16342 344 aaPredicted RBP27.71■■■□□ 2.03
HOXB3-208ENST00000476342 TM4SF18Q96CE8 201 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 ALOXE3Q9BYJ1 711 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 POLR3HQ9Y535 204 aaPredicted RBP27.71■■■□□ 2.03
HOXB3-208ENST00000476342 CLDN16Q9Y5I7 305 aa27.71■■■□□ 2.03
HOXB3-208ENST00000476342 ICAM2P13598 275 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 AP2B1P63010 937 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 OCRLQ01968 901 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 KIAA0040Q15053 153 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 GALNTL6Q49A17 601 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 ATP6AP1LQ52LC2 224 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 GALNT16Q8N428 558 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 ARFGAP2Q8N6H7 521 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 WDR77Q9BQA1 342 aaPredicted RBP27.7■■■□□ 2.03
HOXB3-208ENST00000476342 PCDHA9Q9Y5H5 950 aa27.7■■■□□ 2.03
HOXB3-208ENST00000476342 ATMQ13315 3056 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 GLOD5A6NK44 160 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 TGFBR3LH3BV60 316 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 FGF17O60258 216 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 ITGA3P26006 1051 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 TAS2R50P59544 299 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 RPL38P63173 70 aaKnown RBP27.69■■■□□ 2.02
HOXB3-208ENST00000476342 FOLH1Q04609 750 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 IRAK1BP1Q5VVH5 260 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 NOXRED1Q6NXP6 359 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 ANKRD9Q96BM1 317 aaPredicted RBP27.69■■■□□ 2.02
HOXB3-208ENST00000476342 UBL7Q96S82 380 aaPredicted RBP27.69■■■□□ 2.02
HOXB3-208ENST00000476342 ADNPQ9H2P0 1102 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 ADAP2Q9NPF8 381 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 PNO1Q9NRX1 252 aaKnown RBP27.69■■■□□ 2.02
HOXB3-208ENST00000476342 PNPOQ9NVS9 261 aa27.69■■■□□ 2.02
HOXB3-208ENST00000476342 MKRN2OSH3BPM6 223 aa27.68■■■□□ 2.02
HOXB3-208ENST00000476342 MASP2O00187 686 aa27.68■■■□□ 2.02
HOXB3-208ENST00000476342 IFNA16P05015 189 aa27.68■■■□□ 2.02
HOXB3-208ENST00000476342 SOX8P57073 446 aa27.68■■■□□ 2.02
HOXB3-208ENST00000476342 IGLV3-21P80748 117 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms