RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 PSME3P61289 254 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 FOXM1Q08050 763 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 ABHD13Q7L211 337 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 PRSS42Q7Z5A4 293 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 KIAA2013Q8IYS2 634 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM52Q8NDY8 209 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 OR4D9Q8NGE8 314 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 DOK4Q8TEW6 326 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM121BQ9BXQ6 578 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-217ENST00000475693 APMAPQ9HDC9 416 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 MIEF1Q9NQG6 463 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 FGF21Q9NSA1 209 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 KCMF1Q9P0J7 381 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 HCN3Q9P1Z3 774 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 SEMA5BQ9P283 1151 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 LEF1Q9UJU2 399 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-217ENST00000475693 PCNX2A6NKB5 2137 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 GALR3O60755 368 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-217ENST00000475693 TIAF1O95411 115 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 RPS6KA3P51812 740 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 PDX1P52945 283 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 CASP9P55211 416 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 LIM2P55344 173 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 SIM1P81133 766 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-217ENST00000475693 ID2Q02363 134 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 ERV3-1Q14264 604 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 HPS6Q86YV9 775 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 MSRB3Q8IXL7 192 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 PPCDCQ96CD2 204 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 CTRCQ99895 268 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 KCNH6Q9H252 994 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 IKZF5Q9H5V7 419 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 MRGBPQ9NV56 204 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 SLC25A37Q9NYZ2 338 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 ADAM29Q9UKF5 820 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 USP22Q9UPT9 525 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 POMPQ9Y244 141 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 PTPRZ1P23471 2315 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-217ENST00000475693 D6RAR5 112 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 NTN3O00634 580 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-217ENST00000475693 PROM1O43490 865 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 DDCP20711 480 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 HPCAL1P37235 193 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 NBL1P41271 181 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 DUSP2Q05923 314 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 SQSTM1Q13501 440 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 C16orf72Q14CZ0 275 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 RNF111Q6ZNA4 994 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 TTLL10Q6ZVT0 673 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 SLITRK4Q8IW52 837 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 FBXW8Q8N3Y1 598 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 SRFBP1Q8NEF9 429 aaKnown RBP17.09■□□□□ 0.33
ATG4B-217ENST00000475693 CCDC124Q96CT7 223 aaKnown RBP17.09■□□□□ 0.33
ATG4B-217ENST00000475693 COQ8BQ96D53 544 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 ADA2Q9NZK5 511 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 CROTQ9UKG9 612 aa17.09■□□□□ 0.33
ATG4B-217ENST00000475693 ERAL1O75616 437 aaKnown RBP17.08■□□□□ 0.33
ATG4B-217ENST00000475693 CDC123O75794 336 aaPredicted RBP17.08■□□□□ 0.33
ATG4B-217ENST00000475693 ACP1P24666 158 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 OR1D4P47884 311 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 FOXL2P58012 376 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 MTPNP58546 118 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 SPIDRQ14159 915 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 C1orf189Q5VU69 101 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 ZCCHC7Q8N3Z6 543 aaKnown RBP17.08■□□□□ 0.33
ATG4B-217ENST00000475693 SLC26A7Q8TE54 656 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 PYDC1Q8WXC3 89 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 ZNF501Q96CX3 271 aaPredicted RBP17.08■□□□□ 0.33
ATG4B-217ENST00000475693 ZNF285Q96NJ3 590 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 OR6C1Q96RD1 312 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 C6orf203Q9P0P8 240 aaPredicted RBP17.08■□□□□ 0.33
ATG4B-217ENST00000475693 NDOR1Q9UHB4 597 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 RAPGEFL1Q9UHV5 662 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 ATP6V1HQ9UI12 483 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 PCDHB14Q9Y5E9 798 aa17.08■□□□□ 0.33
ATG4B-217ENST00000475693 GVINP1Q7Z2Y8 2422 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 B3GALT2O43825 422 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 C6orf47O95873 294 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 SLC7A2P52569 658 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 SHC2P98077 582 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 SRSF11Q05519 484 aaKnown RBP17.08■□□□□ 0.32
ATG4B-217ENST00000475693 PDE7AQ13946 482 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 CEACAM7Q14002 265 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 SFT2D3Q587I9 215 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 ZNF551Q7Z340 670 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-217ENST00000475693 C10orf111Q8N326 155 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 PCYOX1LQ8NBM8 494 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 OR8J2Q8NGG1 315 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 NLNQ9BYT8 704 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 PAIP1Q9H074 479 aaKnown RBP17.08■□□□□ 0.32
ATG4B-217ENST00000475693 PRPF19Q9UMS4 504 aaKnown RBP17.08■□□□□ 0.32
ATG4B-217ENST00000475693 DAPP1Q9UN19 280 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 DCHS1Q96JQ0 3298 aa17.08■□□□□ 0.32
ATG4B-217ENST00000475693 PMS2P1A4D2B8 440 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 URADA6NGE7 173 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 BBIP1A8MTZ0 92 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 JRKO75564 520 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 SLC6A2P23975 617 aa17.07■□□□□ 0.32
ATG4B-217ENST00000475693 PTPN6P29350 595 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms