RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CAPS2Q9BXY5 557 aa11.63□□□□□ -0.55
SKA3-206ENST00000475251 ALOXE3Q9BYJ1 711 aa11.63□□□□□ -0.55
SKA3-206ENST00000475251 REXO4Q9GZR2 422 aaKnown RBP11.63□□□□□ -0.55
SKA3-206ENST00000475251 ZNF703Q9H7S9 590 aaPredicted RBP11.63□□□□□ -0.55
SKA3-206ENST00000475251 ACKR4Q9NPB9 350 aa11.63□□□□□ -0.55
SKA3-206ENST00000475251 BEX4Q9NWD9 120 aaPredicted RBP11.63□□□□□ -0.55
SKA3-206ENST00000475251 SPRR3Q9UBC9 169 aa11.63□□□□□ -0.55
SKA3-206ENST00000475251 DAPP1Q9UN19 280 aa11.63□□□□□ -0.55
SKA3-206ENST00000475251 SPACA6W5XKT8 324 aa11.63□□□□□ -0.55
SKA3-206ENST00000475251 ACANP16112 2415 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 ARHGAP21Q5T5U3 1957 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 A0A0G2JN53 185 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 CTAGE15A4D2H0 777 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 ANKDD1BA6NHY2 528 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 TGFBR3LH3BV60 316 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 CYR61O00622 381 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 IL2RAP01589 272 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 HEXAP06865 529 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 C1GALT1C1LP0DN25 315 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 ENDOUP21128 410 aaKnown RBP11.62□□□□□ -0.55
SKA3-206ENST00000475251 HOXC12P31275 282 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 TIMP3P35625 211 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 HNRNPFP52597 415 aaKnown RBP11.62□□□□□ -0.55
SKA3-206ENST00000475251 LIM2P55344 173 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 CDKL1Q00532 357 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 SORDQ00796 357 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 CRYMQ14894 314 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 FAM45BPQ6NSW5 357 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 SBSNQ6UWP8 590 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 CTAGE6Q86UF2 777 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 CNTN4Q8IWV2 1026 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 SLC15A4Q8N697 577 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 RELL2Q8NC24 303 aaPredicted RBP11.62□□□□□ -0.55
SKA3-206ENST00000475251 TMEM52Q8NDY8 209 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 NEIL3Q8TAT5 605 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 NUBPLQ8TB37 319 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 FAM45AQ8TCE6 357 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 SLC2A12Q8TD20 617 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 PTPMT1Q8WUK0 201 aaPredicted RBP11.62□□□□□ -0.55
SKA3-206ENST00000475251 ANKRD7Q92527 254 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 HSPBAP1Q96EW2 488 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 EGFL8Q99944 293 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 NAT9Q9BTE0 207 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 ROGDIQ9GZN7 287 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 AICDAQ9GZX7 198 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 NT5DC2Q9H857 520 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 ZFP64Q9NPA5 681 aa11.62□□□□□ -0.55
SKA3-206ENST00000475251 MAP1AP78559 2803 aaPredicted RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 ARHGEF9O43307 516 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 EPPINO95925 133 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 AHSGP02765 367 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 HNRNPH1P31943 449 aaKnown RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 CEACAM8P31997 349 aaPredicted RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 PIGAP37287 484 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 PLA2G16P53816 162 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 DCAF7P61962 342 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 PCBP2Q15366 365 aaKnown RBP eCLIP11.61□□□□□ -0.55
SKA3-206ENST00000475251 PPP1R3AQ16821 1122 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 ADPRMQ3LIE5 342 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 PIGGQ5H8A4 983 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 SPANXN3Q5MJ09 141 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 ADGRD1Q6QNK2 874 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 Q71RC1 249 aaPredicted RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 PM20D2Q8IYS1 436 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 LRRC25Q8N386 305 aaPredicted RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 SRFBP1Q8NEF9 429 aaKnown RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 PAQR8Q8TEZ7 354 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 NUDT8Q8WV74 236 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 SPACA9Q96E40 222 aaPredicted RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 ART5Q96L15 291 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 RUNDC3BQ96NL0 473 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 QRFPRQ96P65 431 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 YIPF4Q9BSR8 244 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 ZNF395Q9H8N7 513 aaPredicted RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 LYRM4Q9HD34 91 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.61□□□□□ -0.55
SKA3-206ENST00000475251 CNIH4Q9P003 139 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 VWA7Q9Y334 891 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 DNHD1Q96M86 4753 aa11.61□□□□□ -0.55
SKA3-206ENST00000475251 FLNAP21333 2647 aaKnown RBP11.61□□□□□ -0.55
SKA3-206ENST00000475251 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 C15orf38-AP3S2A0A0A6YYH1 394 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 CES2O00748 559 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 WDR47O94967 919 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 CERS1P27544 350 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 GABRB3P28472 473 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 KCNC1P48547 511 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 NKX6-1P78426 367 aaPredicted RBP11.6□□□□□ -0.55
SKA3-206ENST00000475251 ASPHQ12797 758 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 BIKQ13323 160 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 SLBPQ14493 270 aaKnown RBP eCLIP11.6□□□□□ -0.55
SKA3-206ENST00000475251 ZNF791Q3KP31 576 aaPredicted RBP11.6□□□□□ -0.55
SKA3-206ENST00000475251 ACSF3Q4G176 576 aaPredicted RBP11.6□□□□□ -0.55
SKA3-206ENST00000475251 TBCELQ5QJ74 424 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 ABHD17CQ6PCB6 329 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 SLCO4C1Q6ZQN7 724 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 SEM1Q6ZVN7 128 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 CHSY3Q70JA7 882 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 FRA10AC1Q70Z53 315 aa11.6□□□□□ -0.55
SKA3-206ENST00000475251 PPIL6Q8IXY8 311 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms