RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 UBE2J2Q8N2K1 259 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 NAT16Q8N8M0 369 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 OR2T12Q8NG77 320 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 OR6K3Q8NGY3 331 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 WDR20Q8TBZ3 569 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 GLMNQ92990 594 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 MYDGFQ969H8 173 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 CXorf58Q96LI9 332 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 MGLLQ99685 303 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 CCM2Q9BSQ5 444 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 SPATA5L1Q9BVQ7 753 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 KATNAL1Q9BW62 490 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 SLC25A51Q9H1U9 297 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 ANKRD19PQ9H560 264 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 HMX1Q9NP08 348 aaPredicted RBP3.9□□□□□ -1.78
USP16-205ENST00000474835 GPR83Q9NYM4 423 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 CSADQ9Y600 493 aa3.9□□□□□ -1.78
USP16-205ENST00000474835 TRAV14DV4A0A0A6YYC5 116 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 CXorf51AA0A1B0GTR3 108 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 A0A1W2PPL8 197 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 FAM74A7A6NL05 159 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 MCRIP1C9JLW8 97 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 LYRM1O43325 122 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 CHMP2AO43633 222 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 RGS11O94810 467 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 PLGP00747 810 aaPredicted RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 IFNA16P05015 189 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ASGR2P07307 311 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ANKRD34CP0C6C1 535 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 LIMS3P0CW19 117 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 LIMS4P0CW20 117 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 JUPP14923 745 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ELNP15502 786 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 NPR2P20594 1047 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 UQCRC2P22695 453 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 RFC3P40938 356 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 RORCP51449 518 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ARHGDIBP52566 201 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 DAOAP59103 153 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 DEFA1P59665 94 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 DEFA3P59666 94 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 SSTP61278 116 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 SCN1BQ07699 218 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 FOXD4Q12950 439 aaPredicted RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 CTBP1Q13363 440 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 FHL1Q13642 323 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ABRAXAS2Q15018 415 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 TAB1Q15750 504 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 MPPED2Q15777 294 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 PRSS53Q2L4Q9 553 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 GOLGA7BQ2TAP0 167 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 FAM74A3Q4VXF1 159 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 FAM209BQ5JX69 171 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 NAPEPLDQ6IQ20 393 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 UQCC3Q6UW78 93 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 CLEC20AQ6ZU45 233 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ARMC10Q8N2F6 343 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 AGR3Q8TD06 166 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 DNASE2BQ8WZ79 361 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 HBEGFQ99075 208 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 C7orf50Q9BRJ6 194 aaKnown RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 DUSP16Q9BY84 665 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 PPIL3Q9H2H8 161 aaKnown RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 ITM2CQ9NQX7 267 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 CTPS2Q9NRF8 586 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 C1GALT1Q9NS00 363 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ADARB2Q9NS39 739 aaKnown RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 RAD18Q9NS91 495 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 FARSBQ9NSD9 589 aaKnown RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 RASL12Q9NYN1 266 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 SCP2D1Q9UJQ7 156 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 RAB23Q9ULC3 237 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 CFAP54Q96N23 3096 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 GLYATL1P3A0A0U1RQE8 302 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 RNF103-CHMP3A0A140T963 221 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 SMLR1H3BR10 107 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 SUSD5O60279 629 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 CPNE3O75131 537 aaKnown RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 SEC24DO94855 1032 aaPredicted RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 LYPD3O95274 346 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 GLP2RO95838 553 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 MT-ND1P03886 318 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 IL5P05113 134 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 RCC1P18754 421 aaPredicted RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 SLC2A5P22732 501 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 CHRNA4P43681 627 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 SELENOPP49908 381 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 FABP5Q01469 135 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 DBPQ10586 325 aaPredicted RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 IFRD2Q12894 506 aaPredicted RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 PRKG2Q13237 762 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 SRSF5Q13243 272 aaKnown RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 BAATQ14032 418 aaPredicted RBP3.9□□□□□ -1.79
USP16-205ENST00000474835 SERTAD2Q14140 314 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 ZNF345Q14585 488 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 PUM1Q14671 1186 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP16-205ENST00000474835 PCBP1Q15365 356 aaKnown RBP eCLIP3.9□□□□□ -1.79
USP16-205ENST00000474835 FCN2Q15485 313 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 UGT8Q16880 541 aa3.9□□□□□ -1.79
USP16-205ENST00000474835 VMACQ2NL98 169 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms