RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SP1P08047 785 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 MYL2P10916 166 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 ATP5F1P24539 256 aaPredicted RBP14.14□□□□□ -0.15
VARS-223ENST00000474643 TPP2P29144 1249 aaPredicted RBP14.14□□□□□ -0.15
VARS-223ENST00000474643 SERPINB1P30740 379 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 HNRNPH1P31943 449 aaKnown RBP14.14□□□□□ -0.15
VARS-223ENST00000474643 CA7P43166 264 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 CLCN2P51788 898 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 SMSP52788 366 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 KRT71Q3SY84 523 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 KRTCAP3Q53RY4 240 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 ADNP2Q6IQ32 1131 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 SLC25A25Q6KCM7 469 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 CHSY3Q70JA7 882 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 MILR1Q7Z6M3 343 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.14□□□□□ -0.15
VARS-223ENST00000474643 MRGPRGQ86SM5 289 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 SLC22A9Q8IVM8 553 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 CA13Q8N1Q1 262 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 TMEM156Q8N614 296 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 FAM47BQ8NA70 645 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 MDS2Q8NDY4 140 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 SRFBP1Q8NEF9 429 aaKnown RBP14.14□□□□□ -0.15
VARS-223ENST00000474643 OR7G3Q8NG95 312 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 THAP3Q8WTV1 239 aaPredicted RBP14.14□□□□□ -0.15
VARS-223ENST00000474643 CMTM7Q96FZ5 175 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 NSUN5Q96P11 429 aaKnown RBP14.14□□□□□ -0.15
VARS-223ENST00000474643 F2RL3Q96RI0 385 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 PRTFDC1Q9NRG1 225 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 ADGRE2Q9UHX3 823 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 ENTPD4Q9Y227 616 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 MMACHCQ9Y4U1 282 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 SPACA6W5XKT8 324 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 ZGRF1Q86YA3 2104 aa14.14□□□□□ -0.15
VARS-223ENST00000474643 TCRBV16S1A1N1A0A5B0 115 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 ENO4A6NNW6 628 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CDK2AP1O14519 115 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 TFECO14948 347 aaPredicted RBP14.13□□□□□ -0.15
VARS-223ENST00000474643 RGS16O15492 202 aaPredicted RBP14.13□□□□□ -0.15
VARS-223ENST00000474643 MAN1A2O60476 641 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 DNAJB6O75190 326 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 TGFB1P01137 390 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 SBK3P0C264 359 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 RAP1GDS1P52306 607 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CDH13P55290 713 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 HERVK_113P63132 956 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CCDC153Q494R4 210 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CEP85LQ5SZL2 805 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 RPS27LQ71UM5 84 aaKnown RBP14.13□□□□□ -0.15
VARS-223ENST00000474643 EID3Q8N140 333 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 B3GNT7Q8NFL0 401 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 OR2L5Q8NG80 312 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 ELP5Q8TE02 316 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 MS4A6EQ96DS6 147 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CCDC126Q96EE4 140 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CCDC120Q96HB5 630 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 GPR137Q96N19 417 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CDK15Q96Q40 435 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 NPLQ9BXD5 320 aaPredicted RBP14.13□□□□□ -0.15
VARS-223ENST00000474643 ERVK-6Q9BXR3 956 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 SSU72Q9NP77 194 aaKnown RBP14.13□□□□□ -0.15
VARS-223ENST00000474643 MKS1Q9NXB0 559 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 KLF13Q9Y2Y9 288 aaPredicted RBP14.13□□□□□ -0.15
VARS-223ENST00000474643 RNF11Q9Y3C5 154 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CRYBG3Q68DQ2 2970 aa14.13□□□□□ -0.15
VARS-223ENST00000474643 CROCCQ5TZA2 2017 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 SYNDIG1LA6NDD5 238 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 OR7A17O14581 309 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 DLX3O60479 287 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 OTCP00480 354 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 RPS17P08708 135 aaKnown RBP14.12□□□□□ -0.15
VARS-223ENST00000474643 TSPAN8P19075 237 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 CRHR1P34998 444 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 HLCSP50747 726 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 MTTPP55157 894 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 RAB38P57729 211 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 PCDH1Q08174 1060 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 STX4Q12846 297 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 IFT88Q13099 833 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 E2F2Q14209 437 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 AP5B1Q2VPB7 878 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 TMEM35AQ53FP2 167 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 SP5Q6BEB4 398 aaPredicted RBP14.12□□□□□ -0.15
VARS-223ENST00000474643 SH2D5Q6ZV89 423 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 VN1R5Q7Z5H4 357 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 TRABD2AQ86V40 505 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 LURAP1LQ8IV03 231 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 SRRM1Q8IYB3 904 aaKnown RBP14.12□□□□□ -0.15
VARS-223ENST00000474643 LAS2Q8IYD9 372 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 CYP4Z2PQ8N1L4 340 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 GHDCQ8N2G8 530 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 TMEM151AQ8N4L1 468 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 ZNF808Q8N4W9 903 aaPredicted RBP14.12□□□□□ -0.15
VARS-223ENST00000474643 CCNYL1Q8N7R7 359 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 OR52B6Q8NGF0 335 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 HUS1BQ8NHY5 278 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 TRPC4APQ8TEL6 797 aa14.12□□□□□ -0.15
VARS-223ENST00000474643 ZNF473Q8WTR7 871 aaKnown RBP14.12□□□□□ -0.15
VARS-223ENST00000474643 MTFMTQ96DP5 389 aaKnown RBP14.12□□□□□ -0.15
VARS-223ENST00000474643 VMP1Q96GC9 406 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms