RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DYRK3O43781 588 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 PRKNO60260 465 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 UGDHO60701 494 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 LDB3O75112 727 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 MTHFD2P13995 350 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 COX6B1P14854 86 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 TNFRSF8P28908 595 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 TLX1P31314 330 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 PTGER1P34995 402 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 PTGS2P35354 604 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 PIK3CGP48736 1102 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 ALDH18A1P54886 795 aaKnown RBP18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 HSF1Q00613 529 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 SETDB1Q15047 1291 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 OR4C11Q6IEV9 310 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 METTL2BQ6P1Q9 378 aaKnown RBP18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 DOLPP1Q86YN1 238 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 MYLK4Q86YV6 388 aaPredicted RBP18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 CHERPQ8IWX8 916 aaKnown RBP18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 PSD4Q8NDX1 1056 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 HUS1BQ8NHY5 278 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 SLC2A12Q8TD20 617 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 RASL10BQ96S79 203 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 ACTR8Q9H981 624 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 SNX15Q9NRS6 342 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 PHF11Q9UIL8 331 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 TNPO3Q9Y5L0 923 aaKnown RBP18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 APCP25054 2843 aa18.91■□□□□ 0.62
PDLIM4-206ENST00000474421 ESYT3A0FGR9 886 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 WWP2O00308 870 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 HS6ST1O60243 411 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 KLHL2O95198 593 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 CLDN14O95500 239 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 PRF1P14222 555 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 SERPINB8P50452 374 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 GPR85P60893 370 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 RNF4P78317 190 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 SLC7A5Q01650 507 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 SLAMF1Q13291 335 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 DDX39BQ13838 428 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 PFKFB4Q16877 469 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 PAOXQ6QHF9 649 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 IL20RBQ6UXL0 311 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 RGS9BPQ6ZS82 235 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 SRRM1Q8IYB3 904 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 FAM57AQ8TBR7 257 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 TANKQ92844 425 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 ANKRD9Q96BM1 317 aaPredicted RBP18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 SGCZQ96LD1 299 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 PHF12Q96QT6 1004 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 TSPYL1Q9H0U9 437 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 OR51B5Q9H339 312 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 LIN28AQ9H9Z2 209 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 DMRT3Q9NQL9 472 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 ZDHHC18Q9NUE0 388 aa18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 MTRF1LQ9UGC7 380 aaKnown RBP18.9■□□□□ 0.62
PDLIM4-206ENST00000474421 A0A096LPK6 155 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 ACOT7O00154 380 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 SAP18O00422 153 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 CDC40O60508 579 aaKnown RBP eCLIP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 SH3BGRLO75368 114 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 OR6B1O95007 311 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 PTX3P26022 381 aaPredicted RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 TYK2P29597 1187 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 RFC3P40938 356 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 SOX3P41225 446 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 HK2P52789 917 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 IGLV3-21P80748 117 aaPredicted RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 IRF9Q00978 393 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 UAP1Q16222 522 aaPredicted RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 CMPK2Q5EBM0 449 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 ARHGAP11AQ6P4F7 1023 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 OPN5Q6U736 354 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 C16orf47Q6ZP98 133 aaPredicted RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 RTL4Q6ZR62 310 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 GDF7Q7Z4P5 450 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 GPR180Q86V85 440 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 ZCCHC7Q8N3Z6 543 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 MTFMTQ96DP5 389 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 MRRFQ96E11 262 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 RBM18Q96H35 190 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 DGAT2Q96PD7 388 aa18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 RPF2Q9H7B2 306 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 RYDENQ9NUL5 291 aaKnown RBP18.89■□□□□ 0.61
PDLIM4-206ENST00000474421 A0A1B0GTH9 108 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 MYOCOSA0A1B0GUC4 107 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 HMX2A2RU54 273 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 H0YIV9 168 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 KLK8O60259 260 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 BUD31P41223 144 aaPredicted RBP18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 STT3AP46977 705 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 PLIN5Q00G26 463 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 PLGLB1Q02325 96 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 ID2Q02363 134 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 PCBP2Q15366 365 aaKnown RBP eCLIP18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 GK5Q6ZS86 529 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 FGD2Q7Z6J4 655 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 RELL1Q8IUW5 271 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 GOLM1Q8NBJ4 401 aa18.88■□□□□ 0.61
PDLIM4-206ENST00000474421 ART5Q96L15 291 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms