RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SRRM1Q8IYB3 904 aaKnown RBP13.3□□□□□ -0.28
VAMP4-203ENST00000474047 BEST3Q8N1M1 668 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 KIF2BQ8N4N8 673 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 B3GNT7Q8NFL0 401 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 TANKQ92844 425 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 DAZLQ92904 295 aaKnown RBP13.3□□□□□ -0.28
VAMP4-203ENST00000474047 MIB2Q96AX9 1013 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CDCP1Q9H5V8 836 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 FARSBQ9NSD9 589 aaKnown RBP13.3□□□□□ -0.28
VAMP4-203ENST00000474047 A0A1B0GTL3 188 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 OR5H15A6NDH6 313 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 G3V2L1 256 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 MANBAO00462 879 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 DYRK3O43781 588 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 GBAP04062 536 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 KLK1P06870 262 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 TNFSF10P50591 281 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 NAGLUP54802 743 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 TNFRSF17Q02223 184 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 OC90Q02509 493 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 SLC18A2Q05940 514 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 ELAVL1Q15717 326 aaKnown RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 PRR30Q53SZ7 412 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 C18orf63Q68DL7 685 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 OR4N5Q8IXE1 308 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 ELP5Q8TE02 316 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 RBM18Q96H35 190 aaKnown RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 DGAT2Q96PD7 388 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 SMC6Q96SB8 1091 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 UTP23Q9BRU9 249 aaKnown RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 MRPL1Q9BYD6 325 aaKnown RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 RNF32Q9H0A6 362 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 C12orf65Q9H3J6 166 aaKnown RBP13.29□□□□□ -0.28
VAMP4-203ENST00000474047 BRF2Q9HAW0 419 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 MID1IP1Q9NPA3 183 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 AGPAT4Q9NRZ5 378 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 VTI1BQ9UEU0 232 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 ATG4BQ9Y4P1 393 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 PCDHGA10Q9Y5H3 936 aa13.29□□□□□ -0.28
VAMP4-203ENST00000474047 A0A0A6YYD5 115 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 TGFBR3LH3BV60 316 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 FCHO1O14526 889 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 PROM1O43490 865 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 GUCY1B2O75343 617 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 ENO1P06733 434 aaKnown RBP13.28□□□□□ -0.28
VAMP4-203ENST00000474047 NR2F6P10588 404 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 HNRNPH2P55795 449 aaKnown RBP13.28□□□□□ -0.28
VAMP4-203ENST00000474047 ASPHQ12797 758 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 BIKQ13323 160 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 TRABD2AQ86V40 505 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 MREGQ8N565 214 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 NFAM1Q8NET5 270 aaPredicted RBP13.28□□□□□ -0.28
VAMP4-203ENST00000474047 OR14A16Q8NHC5 309 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 NCLNQ969V3 563 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 C19orf60Q96EN9 201 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 VMP1Q96GC9 406 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 APOPT1Q96IL0 206 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 ASF1BQ9NVP2 202 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 LGALS13Q9UHV8 139 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 ADAM29Q9UKF5 820 aa13.28□□□□□ -0.28
VAMP4-203ENST00000474047 GLOD5A6NK44 160 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 GABRR3A8MPY1 467 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 C17orf105B2RV13 164 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 TMPRSS11DO60235 418 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 ESRRBO95718 433 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 HSD3B1P14060 373 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 HSD3B2P26439 372 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 MAPK12P53778 367 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 DNAJB13P59910 316 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 KRT71Q3SY84 523 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 FAM180AQ6UWF9 173 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 LGI4Q8N135 537 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 METTL4Q8N3J2 472 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 HORMAD2Q8N7B1 307 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 GALNT11Q8NCW6 608 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 THAP3Q8WTV1 239 aaPredicted RBP13.27□□□□□ -0.28
VAMP4-203ENST00000474047 ANKRD9Q96BM1 317 aaPredicted RBP13.27□□□□□ -0.28
VAMP4-203ENST00000474047 HBEGFQ99075 208 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 ZNF717Q9BY31 904 aaPredicted RBP13.27□□□□□ -0.28
VAMP4-203ENST00000474047 OR8D2Q9GZM6 311 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 CENPHQ9H3R5 247 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 GSTO2Q9H4Y5 243 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 OXSMQ9NWU1 459 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 ANKRD10Q9NXR5 420 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 VPS29Q9UBQ0 182 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 ZNF225Q9UK10 706 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 RAB21Q9UL25 225 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 PLLPQ9Y342 182 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 ASB4Q9Y574 426 aa13.27□□□□□ -0.28
VAMP4-203ENST00000474047 A0A1W2PR48 441 aa13.27□□□□□ -0.29
VAMP4-203ENST00000474047 H3BQF6 201 aa13.27□□□□□ -0.29
VAMP4-203ENST00000474047 RGS16O15492 202 aaPredicted RBP13.27□□□□□ -0.29
VAMP4-203ENST00000474047 FGF17O60258 216 aa13.27□□□□□ -0.29
VAMP4-203ENST00000474047 OR10H2O60403 315 aa13.27□□□□□ -0.29
VAMP4-203ENST00000474047 PRAMEF2O60811 474 aa13.27□□□□□ -0.29
VAMP4-203ENST00000474047 SPAG7O75391 227 aa13.27□□□□□ -0.29
VAMP4-203ENST00000474047 ZFAND5O76080 213 aa13.27□□□□□ -0.29
VAMP4-203ENST00000474047 ST13P50502 369 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms