RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 EXD3Q8N9H8 876 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 TTC29Q8NA56 475 aaPredicted RBP12.54□□□□□ -0.4
BRAT1-205ENST00000473879 KCT2Q8NC54 265 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 OR9I1Q8NGQ6 314 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 CLHC1Q8NHS4 586 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 ZCCHC10Q8TBK6 192 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 UTP15Q8TED0 518 aaKnown RBP12.54□□□□□ -0.4
BRAT1-205ENST00000473879 C16orf78Q8WTQ4 265 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 TESCQ96BS2 214 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 CLIP3Q96DZ5 547 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 SPDL1Q96EA4 605 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 PRPF18Q99633 342 aaKnown RBP12.54□□□□□ -0.4
BRAT1-205ENST00000473879 MACROD1Q9BQ69 325 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 AICDAQ9GZX7 198 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 KLHL31Q9H511 634 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 ACTL8Q9H568 366 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 CLMPQ9H6B4 373 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 ACTR5Q9H9F9 607 aaPredicted RBP12.54□□□□□ -0.4
BRAT1-205ENST00000473879 AKIRIN1Q9H9L7 192 aaPredicted RBP12.54□□□□□ -0.4
BRAT1-205ENST00000473879 LYARQ9NX58 379 aaKnown RBP12.54□□□□□ -0.4
BRAT1-205ENST00000473879 BAIAP2L1Q9UHR4 511 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 MRPS18BQ9Y676 258 aaKnown RBP12.54□□□□□ -0.4
BRAT1-205ENST00000473879 SLC22A7Q9Y694 548 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 SEC16AO15027 2179 aa12.54□□□□□ -0.4
BRAT1-205ENST00000473879 SPENQ96T58 3664 aaKnown RBP12.53□□□□□ -0.4
BRAT1-205ENST00000473879 KALRNO60229 2985 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 A0A0A6YYD5 115 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 LOC100653049A0A140TA62 436 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 FITM1A5D6W6 292 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 CCDC154A6NI56 674 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 ANGPT2O15123 496 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 CFLARO15519 480 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 EEDO75530 441 aaKnown RBP12.53□□□□□ -0.4
BRAT1-205ENST00000473879 CREG1O75629 220 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 KRT34O76011 436 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 IL6P05231 212 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 CTSBP07858 339 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 PRKAR1AP10644 381 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 SFTPCP11686 197 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 ALOX12P18054 663 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 ATP5A1P25705 553 aaKnown RBP12.53□□□□□ -0.4
BRAT1-205ENST00000473879 RORAP35398 523 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 EMP3P54852 163 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 RAB8AP61006 207 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 MXRA7P84157 204 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 C19orf57Q0VDD7 668 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 GRM7Q14831 915 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 SLC9A5Q14940 896 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 PRTGQ2VWP7 1150 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 COQ5Q5HYK3 327 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 GARNL3Q5VVW2 1013 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 FAM199XQ6PEV8 388 aaPredicted RBP12.53□□□□□ -0.4
BRAT1-205ENST00000473879 UBE3DQ7Z6J8 389 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 FUNDC1Q8IVP5 155 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 ACOT4Q8N9L9 421 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 MR1Q95460 341 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 MTERF3Q96E29 417 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 SERINC2Q96SA4 455 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 FAIM2Q9BWQ8 316 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 SORBS1Q9BX66 1292 aaKnown RBP12.53□□□□□ -0.4
BRAT1-205ENST00000473879 SEMA4CQ9C0C4 833 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 PRDM7Q9NQW5 492 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.53□□□□□ -0.4
BRAT1-205ENST00000473879 NDE1Q9NXR1 346 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 NDUFAF1Q9Y375 327 aa12.53□□□□□ -0.4
BRAT1-205ENST00000473879 A0A0G2JN53 185 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 C4orf51C9J302 202 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 SCAMP2O15127 329 aaKnown RBP12.52□□□□□ -0.41
BRAT1-205ENST00000473879 ZNF749O43361 778 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 B3GALT2O43825 422 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 OR2B3O76000 313 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 ONECUT2O95948 504 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 GBAP04062 536 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 RAB40ALP0C0E4 278 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 FAM58BPP0C7Q3 252 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 SMIM10L1P0DMW3 83 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 T-ENOLP0DO92 83 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 COX7A2P14406 83 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 PTPN4P29074 926 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 TAS2R50P59544 299 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 RPS15P62841 145 aaKnown RBP12.52□□□□□ -0.41
BRAT1-205ENST00000473879 BTN3A2P78410 334 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 SRSF11Q05519 484 aaKnown RBP12.52□□□□□ -0.41
BRAT1-205ENST00000473879 KLC1Q07866 573 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 HEPACAMQ14CZ8 416 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 TIGD2Q4W5G0 525 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 YOD1Q5VVQ6 348 aaPredicted RBP12.52□□□□□ -0.41
BRAT1-205ENST00000473879 REP15Q6BDI9 236 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 FAM71E1Q6IPT2 247 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 TLDC1Q6P9B6 456 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 ZNF793Q6ZN11 406 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 MSANTD1Q6ZTZ1 278 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 RIMKLAQ8IXN7 391 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 ZNF843Q8N446 348 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 KRTCAP2Q8N6L1 136 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 PCYOX1LQ8NBM8 494 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 SMIM10Q96HG1 83 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 EGLN2Q96KS0 407 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 TEX37Q96LM6 180 aa12.52□□□□□ -0.41
BRAT1-205ENST00000473879 DPH2Q9BQC3 489 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms