RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PLIN5Q00G26 463 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 PMP22Q01453 160 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 TNFRSF17Q02223 184 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 ALDH6A1Q02252 535 aaKnown RBP10.76□□□□□ -0.69
CPNE1-222ENST00000473373 IFFO1Q0D2I5 559 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 TERF2Q15554 542 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 FRG2Q64ET8 278 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 H3F3CQ6NXT2 135 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 HSDL2Q6YN16 418 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 RPS27LQ71UM5 84 aaKnown RBP10.76□□□□□ -0.69
CPNE1-222ENST00000473373 PAGE2Q7Z2X7 111 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 GALNTL5Q7Z4T8 443 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 SLC22A9Q8IVM8 553 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 SCUBE1Q8IWY4 988 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 OR4N5Q8IXE1 308 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 LGI4Q8N135 537 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 CYP4Z2PQ8N1L4 340 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 LRRN4CLQ8ND94 238 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 OR4F6Q8NGB9 312 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 OR14A16Q8NHC5 309 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 TRPC4APQ8TEL6 797 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 ASB15Q8WXK1 588 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 NR4A3Q92570 626 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 ART5Q96L15 291 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 SIGLEC12Q96PQ1 595 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 PHF12Q96QT6 1004 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 FRG2BQ96QU4 278 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 CNPPD1Q9BV87 410 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 IQCGQ9H095 443 aaKnown RBP10.76□□□□□ -0.69
CPNE1-222ENST00000473373 NMRK1Q9NWW6 199 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 SEC14L3Q9UDX4 400 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 SH3BGRL2Q9UJC5 107 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 SLC12A4Q9UP95 1085 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 SLC5A6Q9Y289 635 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 HIVEP3Q5T1R4 2406 aa10.76□□□□□ -0.69
CPNE1-222ENST00000473373 MYO9AB2RTY4 2548 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 TLDC2A0PJX2 215 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 A8MVJ9 347 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 CYR61O00622 381 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 OR7A17O14581 309 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 MAN1A2O60476 641 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 GLRA3O75311 464 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 ITGA10O75578 1167 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 UNC5CO95185 931 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 ESRRBO95718 433 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 TBX6O95947 436 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-222ENST00000473373 GBAP04062 536 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 RNF224P0DH78 156 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 NR2F6P10588 404 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 MYL2P10916 166 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 DEKP35659 375 aaKnown RBP10.75□□□□□ -0.69
CPNE1-222ENST00000473373 SSR4P51571 173 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 KCNK10P57789 538 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 MLF1P58340 268 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 HERVK_113P63132 956 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 CLCQ05315 142 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 SRSF11Q05519 484 aaKnown RBP10.75□□□□□ -0.69
CPNE1-222ENST00000473373 CUL3Q13618 768 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 CFAP157Q5JU67 520 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 CCNYL2Q5T2Q4 361 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 SLC25A25Q6KCM7 469 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 UBE3DQ7Z6J8 389 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 LCA5Q86VQ0 697 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 L3MBTL4Q8NA19 623 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 DNAJB8Q8NHS0 232 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 ACMSDQ8TDX5 336 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 NTMT1Q9BV86 223 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 ERVK-6Q9BXR3 956 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 HES7Q9BYE0 225 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 TSPAN10Q9H1Z9 355 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-222ENST00000473373 PFDN4Q9NQP4 134 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 HPF1Q9NWY4 346 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 TMEM216Q9P0N5 145 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 DCDC2Q9UHG0 476 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 STK38LQ9Y2H1 464 aa10.75□□□□□ -0.69
CPNE1-222ENST00000473373 KLF13Q9Y2Y9 288 aaPredicted RBP10.75□□□□□ -0.69
CPNE1-222ENST00000473373 TRGV8A0A0C4DH27 118 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 CCDC151A5D8V7 595 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 GLOD5A6NK44 160 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 TGFBR3LH3BV60 316 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 WWP2O00308 870 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 FOXE1O00358 373 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 GUCY1B2O75343 617 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 OR4F21O95013 312 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 KRT6AP02538 564 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 KRT6BP04259 564 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 KLK1P06870 262 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 SP1P08047 785 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 GSTA1P08263 222 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 RPS17P08708 135 aaKnown RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 FAM58BPP0C7Q3 252 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 ATP5F1P24539 256 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-222ENST00000473373 COL8A1P27658 744 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 PIK3R1P27986 724 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 GCAP28676 217 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 CCT5P48643 541 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 KRT6CP48668 564 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 MAPK12P53778 367 aa10.74□□□□□ -0.69
CPNE1-222ENST00000473373 HNRNPH2P55795 449 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms