RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PRPH2P23942 346 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 ITGA3P26006 1051 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 SERPINB3P29508 390 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 SLC1A6P48664 564 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 HMGCS1Q01581 520 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 STX4Q12846 297 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 CHAF1BQ13112 559 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 STX3Q13277 289 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 MYBPC3Q14896 1274 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 TTMPQ5BVD1 217 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 SPDYAQ5MJ70 313 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 ATG16L1Q676U5 607 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 PLAG1Q6DJT9 500 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 TCTN3Q6NUS6 607 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 JMJD6Q6NYC1 403 aaPredicted RBP14.18□□□□□ -0.14
SNX13-205ENST00000471744 GALNT18Q6P9A2 607 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 PAPD4Q6PIY7 484 aaKnown RBP14.18□□□□□ -0.14
SNX13-205ENST00000471744 HPS6Q86YV9 775 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 KBTBD2Q8IY47 623 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 MGARPQ8TDB4 240 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 TWIST2Q8WVJ9 160 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 IMMP1LQ96LU5 166 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 FAIM2Q9BWQ8 316 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 LHPPQ9H008 270 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 ILKAPQ9H0C8 392 aaPredicted RBP14.18□□□□□ -0.14
SNX13-205ENST00000471744 ZNF160Q9HCG1 818 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 MLXIPLQ9NP71 852 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 ADAP2Q9NPF8 381 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 NECTIN3Q9NQS3 549 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 GPR83Q9NYM4 423 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 FIS1Q9Y3D6 152 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 RAP2CQ9Y3L5 183 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 ATG4BQ9Y4P1 393 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 DNAJC15Q9Y5T4 150 aa14.18□□□□□ -0.14
SNX13-205ENST00000471744 OR2W5A6NFC9 320 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 PCDH7O60245 1069 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 DNAJB5O75953 348 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 SASH3O75995 380 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 GBAP04062 536 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 SERPINA7P05543 415 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 CHN1P15882 459 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 TIA1P31483 386 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNX13-205ENST00000471744 HNRNPFP52597 415 aaKnown RBP14.17□□□□□ -0.14
SNX13-205ENST00000471744 VWA5B1Q5TIE3 1220 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 OR52E8Q6IFG1 317 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 SCIMPQ6UWF3 145 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 DDIASQ8IXT1 998 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 TMEM52Q8NDY8 209 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 C9orf43Q8TAL5 461 aaPredicted RBP14.17□□□□□ -0.14
SNX13-205ENST00000471744 M1APQ8TC57 530 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 C11orf24Q96F05 449 aaPredicted RBP14.17□□□□□ -0.14
SNX13-205ENST00000471744 ABHD17AQ96GS6 310 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 PELOQ9BRX2 385 aaKnown RBP14.17□□□□□ -0.14
SNX13-205ENST00000471744 HAO1Q9UJM8 370 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 WBP11Q9Y2W2 641 aaKnown RBP14.17□□□□□ -0.14
SNX13-205ENST00000471744 ZNF451Q9Y4E5 1061 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 LOC400499M0QZD8 3231 aa14.17□□□□□ -0.14
SNX13-205ENST00000471744 IGSF10Q6WRI0 2623 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 GNG14A0A1W2PPG7 69 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 A0A1W2PR48 441 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 C1orf226A1L170 272 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 SAGE2PA6NJ88 616 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 SEC24DO94855 1032 aaPredicted RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 AIFM1O95831 613 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 PRR35P0CG20 571 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 COX7A2P14406 83 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 ARRB2P32121 409 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 PGDP52209 483 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 IGLV3-21P80748 117 aaPredicted RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 BTKQ06187 659 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 ELAVL1Q15717 326 aaKnown RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 UGT3A2Q3SY77 523 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 LACTB2Q53H82 288 aaPredicted RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 NDUFAF5Q5TEU4 345 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 C18orf63Q68DL7 685 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 PCSK4Q6UW60 755 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 CLNKQ7Z7G1 428 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 PARP9Q8IXQ6 854 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 TMEM132CQ8N3T6 1108 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 EXD3Q8N9H8 876 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 FDCSPQ8NFU4 85 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 AGR3Q8TD06 166 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 DAZLQ92904 295 aaKnown RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 APIPQ96GX9 242 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 THOC3Q96J01 351 aaKnown RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 SMAD5Q99717 465 aaKnown RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 WDR77Q9BQA1 342 aaPredicted RBP14.16□□□□□ -0.14
SNX13-205ENST00000471744 MESP1Q9BRJ9 268 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 ALOXE3Q9BYJ1 711 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 SLC25A18Q9H1K4 315 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 LRTM1Q9HBL6 345 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 THAP1Q9NVV9 213 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 C1orf109Q9NX04 203 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 C5AR2Q9P296 337 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 VTI1BQ9UEU0 232 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 ZDHHC2Q9UIJ5 367 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 PSME2Q9UL46 239 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 TMED5Q9Y3A6 229 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 CCL27Q9Y4X3 112 aa14.16□□□□□ -0.14
SNX13-205ENST00000471744 CLDN16Q9Y5I7 305 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms