RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 CACUL1Q86Y37 369 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 PARP8Q8N3A8 854 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 METTL27Q8N6F8 245 aaPredicted RBP5.87□□□□□ -1.47
SMC5-202ENST00000471372 CCDC185Q8N715 623 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 DMBX1Q8NFW5 382 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 PCED1BQ96HM7 432 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 ZSCAN5AQ9BUG6 496 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 C1QTNF4Q9BXJ3 329 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 CXXC4Q9H2H0 198 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 GORASP2Q9H8Y8 452 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 TAAR2Q9P1P5 351 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 ERVK-18Q9QC07 812 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 LHX3Q9UBR4 397 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 FOXJ3Q9UPW0 622 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 NEDD4P46934 1319 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 KIF7Q2M1P5 1343 aa5.87□□□□□ -1.47
SMC5-202ENST00000471372 CIDEAO60543 219 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 CSDE1O75534 798 aaKnown RBP5.86□□□□□ -1.47
SMC5-202ENST00000471372 OAZ2O95190 189 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 OPN1MWP04001 364 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 APRTP07741 180 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 UMODP07911 640 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 OPN1MW2P0DN77 364 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 OPN1MW3P0DN78 364 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 CLUP10909 449 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 GLRA2P23416 452 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 MARK3P27448 753 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 CDKN2AP42771 156 aaKnown RBP5.86□□□□□ -1.47
SMC5-202ENST00000471372 ART1P52961 327 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 NME3Q13232 169 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 SRSF9Q13242 221 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMC5-202ENST00000471372 C3AR1Q16581 482 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 CLPPQ16740 277 aaPredicted RBP5.86□□□□□ -1.47
SMC5-202ENST00000471372 SLC36A3Q495N2 470 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 NCR3LG1Q68D85 454 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 CENPPQ6IPU0 288 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 VASH2Q86V25 355 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 NAGSQ8N159 534 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 ELMOD1Q8N336 334 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 STKLD1Q8NE28 680 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 CASP10Q92851 521 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 LMLNQ96KR4 655 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 IL12RB2Q99665 862 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 GPA33Q99795 319 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 C3orf14Q9HBI5 128 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 S100A14Q9HCY8 104 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 SIX2Q9NPC8 291 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 FARSBQ9NSD9 589 aaKnown RBP5.86□□□□□ -1.47
SMC5-202ENST00000471372 SMPD3Q9NY59 655 aaPredicted RBP5.86□□□□□ -1.47
SMC5-202ENST00000471372 PLCL2Q9UPR0 1127 aa5.86□□□□□ -1.47
SMC5-202ENST00000471372 MYMKA6NI61 221 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 ANHXE9PGG2 379 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 LMO7DNF2Z398 122 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 XPO1O14980 1071 aaKnown RBP5.85□□□□□ -1.47
SMC5-202ENST00000471372 MTX2O75431 263 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 PALMO75781 387 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 OR4F21O95013 312 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 ASNSP08243 561 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 SLC2A2P11168 524 aaPredicted RBP5.85□□□□□ -1.47
SMC5-202ENST00000471372 PLA2G2AP14555 144 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 RPS2P15880 293 aaKnown RBP5.85□□□□□ -1.47
SMC5-202ENST00000471372 TMOD1P28289 359 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 ALDH3B1P43353 468 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 OR3A2P47893 321 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 NPY2RP49146 381 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 BACE1P56817 501 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 GPM6BQ13491 265 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 ZDHHC21Q8IVQ6 265 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 GCNT2Q8N0V5 402 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 TRIM58Q8NG06 486 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 OR2T11Q8NH01 316 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 CD101Q93033 1021 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 MED30Q96HR3 178 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 TMEM204Q9BSN7 226 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 MRPL13Q9BYD1 178 aaKnown RBP5.85□□□□□ -1.47
SMC5-202ENST00000471372 POLR1EQ9GZS1 481 aaKnown RBP5.85□□□□□ -1.47
SMC5-202ENST00000471372 ATP13A3Q9H7F0 1226 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 CD93Q9NPY3 652 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.85□□□□□ -1.47
SMC5-202ENST00000471372 P2RX2Q9UBL9 471 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 BCAP29Q9UHQ4 241 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 CHMP2BQ9UQN3 213 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 KLHDC2Q9Y2U9 406 aa5.85□□□□□ -1.47
SMC5-202ENST00000471372 SHISA7A6NL88 538 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 SEC24AO95486 1093 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 MBD3O95983 291 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 RPL35AP18077 110 aaKnown RBP5.84□□□□□ -1.47
SMC5-202ENST00000471372 TNNI3P19429 210 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 PAX7P23759 505 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 DLSTP36957 453 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 SLC1A6P48664 564 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 IL24Q13007 206 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 CCDC152Q4G0S7 254 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 ATP1A1-AS1Q5TC04 95 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 SLC25A47Q6Q0C1 308 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 RBMS3Q6XE24 437 aaKnown RBP5.84□□□□□ -1.47
SMC5-202ENST00000471372 C1QL2Q7Z5L3 287 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 MAB21L3Q8N8X9 362 aa5.84□□□□□ -1.47
SMC5-202ENST00000471372 COLGALT1Q8NBJ5 622 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms