RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ZBTB11O95625 1053 aaPredicted RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 CER1O95813 267 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 C1QCP02747 245 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SP9P0CG40 484 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 HOXB6P17509 224 aaKnown RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 CPN2P22792 545 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 ALDH4A1P30038 563 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 CSF2RBP32927 897 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SOAT1P35610 550 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 CHI3L1P36222 383 aaPredicted RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 PLA2G5P39877 138 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 MAGEA8P43361 318 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 MANFP55145 182 aaKnown RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 LIM2P55344 173 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 OR1D5P58170 312 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SKP1P63208 163 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 VEZF1Q14119 521 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 NR0B2Q15466 257 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 RGNQ15493 299 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 DEFB110Q30KQ9 67 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 TBCELQ5QJ74 424 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SAXO2Q658L1 398 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 C18orf63Q68DL7 685 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SLC23A3Q6PIS1 610 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 WDR74Q6RFH5 385 aaPredicted RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 TMEM64Q6YI46 380 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 PRSS42Q7Z5A4 293 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SPRED1Q7Z699 444 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 KMT5CQ86Y97 462 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 PTOV1Q86YD1 416 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 PDSS2Q86YH6 399 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 GATAD2AQ86YP4 633 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 PLXDC1Q8IUK5 500 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SAMD14Q8IZD0 417 aaPredicted RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 CLEC4FQ8N1N0 589 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 FAM181AQ8N9Y4 354 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 PNPT1Q8TCS8 783 aaKnown RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 CANT1Q8WVQ1 401 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 NCSTNQ92542 709 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 FIG4Q92562 907 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 NCLNQ969V3 563 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 CCDC74AQ96AQ1 378 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 NEURL3Q96EH8 262 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 AHCYL2Q96HN2 611 aaKnown RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 C10orf90Q96M02 699 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 AMDHD1Q96NU7 426 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 VCX3BQ9H321 246 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 GAREM1Q9H706 876 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 ANKHQ9HCJ1 492 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 PDE7BQ9NP56 450 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SEMA3GQ9NS98 782 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SIRT3Q9NTG7 399 aaPredicted RBP8.87□□□□□ -0.99
VPS52-216ENST00000471309 GIMAP4Q9NUV9 329 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 OLAHQ9NV23 265 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SOHLH2Q9NX45 425 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 KCMF1Q9P0J7 381 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 C5AR2Q9P296 337 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 SLC6A14Q9UN76 642 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 NAALAD2Q9Y3Q0 740 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 CROCCQ5TZA2 2017 aa8.87□□□□□ -0.99
VPS52-216ENST00000471309 LY6G6EA0A0G2JKS1 128 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 FITM1A5D6W6 292 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 GLOD5A6NK44 160 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ARHGAP33O14559 1287 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 PGRMC2O15173 223 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TOX3O15405 576 aaPredicted RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 HNRNPRO43390 633 aaKnown RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 B4GAT1O43505 415 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 PEX1O43933 1283 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TNFRSF21O75509 655 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 CREG1O75629 220 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 CAPNS1P04632 268 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 FCGR1AP12314 374 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 BMP2P12643 396 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 IL10P22301 178 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 CD1CP29017 333 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 AVPR2P30518 371 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TLX1P31314 330 aaPredicted RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 PCGF2P35227 344 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 SOX11P35716 441 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 PPM1FP49593 454 aaPredicted RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 CDK9P50750 372 aaKnown RBP8.86□□□□□ -0.99
VPS52-216ENST00000471309 NCBP2P52298 156 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS52-216ENST00000471309 EMP3P54852 163 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 HSD11B2P80365 405 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 RBBP4Q09028 425 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 HSPB3Q12988 150 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 SQSTM1Q13501 440 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 RUNX2Q13950 521 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 SPIDRQ14159 915 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ANGPT1Q15389 498 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TRIP10Q15642 601 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 ADRM1Q16186 407 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 NDUFA9Q16795 377 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 INAVAQ3KP66 663 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TRIM61Q5EBN2 209 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 TCTE1Q5JU00 501 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS52-216ENST00000471309 GCNT6Q5T4J0 391 aa8.86□□□□□ -0.99
VPS52-216ENST00000471309 OGFRL1Q5TC84 451 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms