RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 AQP5P55064 265 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 FOXA1P55317 472 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 TBPL1P62380 186 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 UBE2IP63279 158 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 NKX6-1P78426 367 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 NHLH2Q02577 135 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 CDC16Q13042 620 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 LCP2Q13094 533 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 DDX39BQ13838 428 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 DOC2AQ14183 400 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 PDCD2Q16342 344 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 CYP2A13Q16696 494 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 HIST2H2ACQ16777 129 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 TUBB8Q3ZCM7 444 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 AASDHQ4L235 1098 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 FLYWCH1Q4VC44 716 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 C14orf28Q4W4Y0 310 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 CDKL4Q5MAI5 379 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 TCHHL1Q5QJ38 904 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 VWA5B1Q5TIE3 1220 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 KIAA1614Q5VZ46 1190 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 HIST2H2AA3Q6FI13 130 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 IRGCQ6NXR0 463 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 LCTLQ6UWM7 567 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 FAM92BQ6ZTR7 304 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 TMEM26Q6ZUK4 368 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 MED25Q71SY5 747 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 OVCH2Q7RTZ1 564 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 LRRC70Q7Z2Q7 622 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 EFL1Q7Z2Z2 1120 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 TMPRSS11BQ86T26 416 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 C17orf64Q86WR6 236 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 FAM90A1Q86YD7 464 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 PLD3Q8IV08 490 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 RASGRP3Q8IV61 690 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC35F3Q8IY50 421 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 ADGRF3Q8IZF5 1079 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 CLYBLQ8N0X4 340 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 SFRP1Q8N474 314 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 RNF175Q8N4F7 328 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 LINC01555Q8NAE3 123 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 OR2L8Q8NGY9 312 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 OR56A3Q8NH54 315 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 IL17DQ8TAD2 202 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 PPP1R35Q8TAP8 253 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 RAB3IL1Q8TBN0 382 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 BCAS4Q8TDM0 211 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 SAP25Q8TEE9 199 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 AGAP11Q8TF27 550 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF473Q8WTR7 871 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 UBTD2Q8WUN7 234 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC5A11Q8WWX8 675 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 NEIL2Q969S2 332 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 SLC35A4Q96G79 324 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 APOLD1Q96LR9 279 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 PPM1MQ96MI6 270 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 RILPQ96NA2 401 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF317Q96PQ6 595 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 OR4K3Q96R72 315 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 DCLRE1CQ96SD1 692 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 SORT1Q99523 831 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 PRRX2Q99811 253 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 NUF2Q9BZD4 464 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 REXO4Q9GZR2 422 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 CCDC134Q9H6E4 229 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 KIR3DX1Q9H7L2 352 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 ZNF703Q9H7S9 590 aaPredicted RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 MRPS30Q9NP92 439 aaKnown RBP3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 POT1Q9NUX5 634 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 RLIMQ9NVW2 624 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 NLGN3Q9NZ94 848 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 SH2B3Q9UQQ2 575 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 BTRCQ9Y297 605 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 CHST2Q9Y4C5 530 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 PCDHGA5Q9Y5G8 931 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 PTGDR2Q9Y5Y4 395 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 KCNE2Q9Y6J6 123 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 CSNK1G3Q9Y6M4 447 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 USH1CQ9Y6N9 552 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 ANKRD12Q6UB98 2062 aa3.9□□□□□ -1.79
TMEM39A-204ENST00000468545 ADAMTS9Q9P2N4 1935 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SPAG17Q6Q759 2223 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 A0A0J9YVX5 310 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ATP6AP2A0A1C7CYW4 349 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 A0A1W2PPV9 198 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CDHR4A6H8M9 788 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 C4orf47A7E2U8 309 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 C2orf74A8MZ97 194 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 H3BUI4 141 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SAP18O00422 153 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 MANBAO00462 879 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 PIP5K1BO14986 540 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 CASC3O15234 703 aaKnown RBP3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 YKT6O15498 198 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 ZW10O43264 779 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 B4GAT1O43505 415 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 OR1F1O43749 312 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 SH3BP5O60239 455 aa3.89□□□□□ -1.79
TMEM39A-204ENST00000468545 LCMT2O60294 686 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms