RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ADAM11O75078 769 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 HPNP05981 417 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 PGRP06401 933 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 MPC1LP0DKB6 136 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 POU2F1P14859 743 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 TNNI3P19429 210 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 SAT1P21673 171 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 CCND1P24385 295 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 UGT2B10P36537 528 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 GRIA1P42261 906 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 MASP1P48740 699 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 MTTPP55157 894 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 EEF1A1P68104 462 aaKnown RBP9.33□□□□□ -0.92
HDAC3-203ENST00000467533 GAB1Q13480 694 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 NR1I3Q14994 352 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 MPEG1Q2M385 716 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 PIGGQ5H8A4 983 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 BEX5Q5H9J7 111 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 NHSL2Q5HYW2 709 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 TOR1AIP1Q5JTV8 583 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 EEF1A1P5Q5VTE0 462 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 LIPNQ5VXI9 398 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 LCTLQ6UWM7 567 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 MED12LQ86YW9 2145 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 ASB11Q8WXH4 323 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 KRT35Q92764 455 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 ART5Q96L15 291 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 OSBPL8Q9BZF1 889 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 CHRAC1Q9NRG0 131 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 ZFP69BQ9UJL9 534 aa9.33□□□□□ -0.92
HDAC3-203ENST00000467533 CHCHD2Q9Y6H1 151 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-203ENST00000467533 DYSFO75923 2080 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 A0A0G2JN53 185 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 A0A1W2PNV4 684 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 ERI2A8K979 691 aaKnown RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 C17orf105B2RV13 164 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 E7EVH7 732 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 UBFD1O14562 309 aaKnown RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 TRIM3O75382 744 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 TNFSF13O75888 250 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 PLAUP00749 431 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 GYPCP04921 128 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 ZNF16P17020 682 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 GCKP35557 465 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 CDKN1AP38936 164 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 KCNJ5P48544 419 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 GDF10P55107 478 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 RAB38P57729 211 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 COPS2P61201 443 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 BTN3A2P78410 334 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 SRYQ05066 204 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 NAE1Q13564 534 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 PDLIM3Q53GG5 364 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 EIPR1Q53HC9 387 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 MRNIPQ6NTE8 343 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 AGTRAPQ6RW13 159 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 SCIMPQ6UWF3 145 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 MBOAT1Q6ZNC8 495 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 CLEC17AQ6ZS10 378 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 IL17RELQ6ZVW7 336 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 SDCCAG8Q86SQ7 713 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 MEX3DQ86XN8 651 aaKnown RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 GRAMD2AQ8IUY3 354 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 SPNS2Q8IVW8 549 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 ZNF595Q8IYB9 648 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 DND1Q8IYX4 353 aaKnown RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 PPM1NQ8N819 430 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 CNEP1R1Q8N9A8 125 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 GIMAP7Q8NHV1 300 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 PTPMT1Q8WUK0 201 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 DIO2Q92813 273 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 WNT2BQ93097 391 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 IQCDQ96DY2 449 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 FAR2Q96K12 515 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 HAUS8Q9BT25 410 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 NAT10Q9H0A0 1025 aaKnown RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 SPNS1Q9H2V7 528 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 KLHL31Q9H511 634 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 AMFRQ9UKV5 643 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 CNOT11Q9UKZ1 510 aaKnown RBP9.32□□□□□ -0.92
HDAC3-203ENST00000467533 MAPRE3Q9UPY8 281 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 C15orf41Q9Y2V0 281 aa9.32□□□□□ -0.92
HDAC3-203ENST00000467533 SMTNL1A8MU46 457 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 GOLGA8KD6RF30 607 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 C16orf97H3BN30 126 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 GOLGA8TH3BQL2 631 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ENO3P13929 434 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-203ENST00000467533 AHRP35869 848 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 MSH2P43246 934 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 SCTRP47872 440 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 PCYT1AP49585 367 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 CLCN7P51798 805 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 NAGLUP54802 743 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 STX4Q12846 297 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 RUNX2Q13950 521 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ASTE1Q2TB18 679 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-203ENST00000467533 TBCELQ5QJ74 424 aa9.31□□□□□ -0.92
HDAC3-203ENST00000467533 ANKRD34AQ69YU3 496 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms