RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CT47A1Q5JQC4 288 aaPredicted RBP11.39□□□□□ -0.59
UBR4-210ENST00000466969 TBCELQ5QJ74 424 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 SLC9A4Q6AI14 798 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 CAPN13Q6MZZ7 669 aaPredicted RBP11.39□□□□□ -0.59
UBR4-210ENST00000466969 KIAA1328Q86T90 577 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 DTX2Q86UW9 622 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 ZNF567Q8N184 647 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 AFAP1L2Q8N4X5 818 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 TC2NQ8N9U0 490 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 ZNF610Q8N9Z0 462 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 ZNF740Q8NDX6 193 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 OR8K3Q8NH51 312 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 ASB11Q8WXH4 323 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 DAZLQ92904 295 aaKnown RBP11.39□□□□□ -0.59
UBR4-210ENST00000466969 VAT1Q99536 393 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 FERMT1Q9BQL6 677 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 CACNG6Q9BXT2 260 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 ING1Q9UK53 422 aaPredicted RBP11.39□□□□□ -0.59
UBR4-210ENST00000466969 IKBKGQ9Y6K9 419 aa11.39□□□□□ -0.59
UBR4-210ENST00000466969 MYO1FO00160 1098 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 TRIM3O75382 744 aaPredicted RBP11.38□□□□□ -0.59
UBR4-210ENST00000466969 LRATO95237 230 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 CD8BP10966 210 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 KDELR1P24390 212 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 MSNP26038 577 aaKnown RBP11.38□□□□□ -0.59
UBR4-210ENST00000466969 MASP1P48740 699 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 ASPHQ12797 758 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 MSLNQ13421 630 aaPredicted RBP11.38□□□□□ -0.59
UBR4-210ENST00000466969 MPEG1Q2M385 716 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 BBS9Q3SYG4 887 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 PIGGQ5H8A4 983 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 AGAP6Q5VW22 663 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 RINLQ6ZS11 566 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 BZW1Q7L1Q6 419 aaKnown RBP11.38□□□□□ -0.59
UBR4-210ENST00000466969 KRT222Q8N1A0 295 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 PPFIBP2Q8ND30 876 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 HTRA1Q92743 480 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 SPACA9Q96E40 222 aaPredicted RBP11.38□□□□□ -0.59
UBR4-210ENST00000466969 UBQLN3Q9H347 655 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 TAB2Q9NYJ8 693 aa11.38□□□□□ -0.59
UBR4-210ENST00000466969 SAE1Q9UBE0 346 aaPredicted RBP11.38□□□□□ -0.59
UBR4-210ENST00000466969 CDC7O00311 574 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 SMAD9O15198 467 aaKnown RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 TGM6O95932 706 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 B3GALT4O96024 378 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 IFNA16P05015 189 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 FMO4P31512 558 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 COILP38432 576 aaPredicted RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 KIR2DL2P43627 348 aaPredicted RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 DYNLT1P63172 113 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 ELAVL1Q15717 326 aaKnown RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 DEF8Q6ZN54 512 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 USP43Q70EL4 1123 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 DND1Q8IYX4 353 aaKnown RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 MORN4Q8NDC4 146 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 OR10G3Q8NGC4 313 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 STYXQ8WUJ0 223 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 ATL1Q8WXF7 558 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 RAPGEF5Q92565 580 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 MRFAP1L1Q96HT8 127 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 GNRHR2Q96P88 292 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 SYT11Q9BT88 431 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 OR8D2Q9GZM6 311 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 CLK4Q9HAZ1 481 aaKnown RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 CISD1Q9NZ45 108 aaKnown RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 PROCRQ9UNN8 238 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 ZNF148Q9UQR1 794 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 DTX4Q9Y2E6 619 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 C15orf41Q9Y2V0 281 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 ATP6V1DQ9Y5K8 247 aa11.37□□□□□ -0.59
UBR4-210ENST00000466969 CHCHD2Q9Y6H1 151 aaPredicted RBP11.37□□□□□ -0.59
UBR4-210ENST00000466969 PRR14LQ5THK1 2151 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 UQCRHLA0A096LP55 91 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 GOLGA6L9A6NEM1 432 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 OR51F1A6NGY5 319 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 EIF3FO00303 357 aaPredicted RBP11.36□□□□□ -0.59
UBR4-210ENST00000466969 PIN1P1O15428 100 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 NDUFS4O43181 175 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 CEP104O60308 925 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 CGAP01215 116 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 TPM2P07951 284 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 PAMP19021 973 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 PTNP21246 168 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 PCMT1P22061 227 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 ADRA1AP35348 466 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 GRK3P35626 688 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 SLC13A2Q13183 592 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 FGFBP1Q14512 234 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 VAX1Q5SQQ9 334 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 NCMAPQ5T1S8 102 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 DENND5AQ6IQ26 1287 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 YRDCQ86U90 279 aaKnown RBP11.36□□□□□ -0.59
UBR4-210ENST00000466969 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 PIAS4Q8N2W9 510 aaPredicted RBP11.36□□□□□ -0.59
UBR4-210ENST00000466969 KBTBD8Q8NFY9 601 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 DIO2Q92813 273 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 RUNDC3BQ96NL0 473 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 PIMREGQ9BSJ6 248 aa11.36□□□□□ -0.59
UBR4-210ENST00000466969 G6PC3Q9BUM1 346 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms