RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 OR10H2O60403 315 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 P04436 131 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 CD22P20273 847 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 GMPRP36959 345 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 SOX3P41225 446 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 PIK3CGP48736 1102 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 ETF1P62495 437 aaKnown RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 PPIAP62937 165 aaKnown RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 PLIN5Q00G26 463 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 PFKFB4Q16877 469 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 OR4C11Q6IEV9 310 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 GRHL2Q6ISB3 625 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 OPN5Q6U736 354 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 RTL4Q6ZR62 310 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 FAM47EQ6ZV65 393 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 ZNF227Q86WZ6 799 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 ARMC10Q8N2F6 343 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 OR7G3Q8NG95 312 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 FAM57AQ8TBR7 257 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 ZNF473Q8WTR7 871 aaKnown RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 KCTD4Q8WVF5 259 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 NXNL1Q96CM4 212 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 ART5Q96L15 291 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 RASL10BQ96S79 203 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 RPF2Q9H7B2 306 aaKnown RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 WDR41Q9HAD4 459 aa16.28■□□□□ 0.2
COL7A1-206ENST00000466591 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 MTRF1LQ9UGC7 380 aaKnown RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 ZNF223Q9UK11 482 aaPredicted RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 PPIEQ9UNP9 301 aaKnown RBP16.28■□□□□ 0.2
COL7A1-206ENST00000466591 G3V3Y1 287 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 PRKNO60260 465 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-206ENST00000466591 OR6B1O95007 311 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 TYK2P29597 1187 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 SERPINB8P50452 374 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 RNF4P78317 190 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 SLC7A5Q01650 507 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 RGS9BPQ6ZS82 235 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 NCCRP1Q6ZVX7 275 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-206ENST00000466591 TAOK1Q7L7X3 1001 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 LAS2Q8IYD9 372 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 HUS1BQ8NHY5 278 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 SLC22A8Q8TCC7 542 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 MTERF1Q99551 399 aaKnown RBP16.27■□□□□ 0.2
COL7A1-206ENST00000466591 VPS11Q9H270 941 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 TP63Q9H3D4 680 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-206ENST00000466591 IGSF5Q9NSI5 407 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 SACM1LQ9NTJ5 587 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 ASB1Q9Y576 335 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 PCDHGA11Q9Y5H2 935 aa16.27■□□□□ 0.2
COL7A1-206ENST00000466591 A0A096LPK6 155 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 IQANK1A0A1B0GTG1 560 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 ESYT3A0FGR9 886 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 FANCGO15287 622 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 PRAMEF4O60810 478 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 EPORP19235 508 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 ELAVL4P26378 380 aaKnown RBP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 CASP2P42575 452 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 HK2P52789 917 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 IRF9Q00978 393 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 BIKQ13323 160 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 ZNF750Q32MQ0 723 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 NDUFAF5Q5TEU4 345 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 C6orf163Q5TEZ5 329 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 PRAMEF9Q5VWM5 478 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 TTC19Q6DKK2 380 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 ZNF793Q6ZN11 406 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 SLC29A4Q7RTT9 530 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 GPR180Q86V85 440 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 OR4N5Q8IXE1 308 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 C17orf53Q8N3J3 647 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 ZFP62Q8NB50 900 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 OR2M7Q8NG81 312 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 OR5M3Q8NGP4 307 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 C16orf52Q8NHV5 167 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 PTPMT1Q8WUK0 201 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 UBTD2Q8WUN7 234 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 SCYL1Q96KG9 808 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 GAL3ST4Q96RP7 486 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 ATOH8Q96SQ7 321 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 FAM173AQ9BQD7 235 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 CNPPD1Q9BV87 410 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 SORBS1Q9BX66 1292 aaKnown RBP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 LDAHQ9H6V9 325 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 SNX15Q9NRS6 342 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 TNPO3Q9Y5L0 923 aaKnown RBP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL7A1-206ENST00000466591 CREBBPQ92793 2442 aa16.26■□□□□ 0.19
COL7A1-206ENST00000466591 TBX6O95947 436 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-206ENST00000466591 C2P06681 752 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 INHBAP08476 426 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 PTX3P26022 381 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-206ENST00000466591 SSTR2P30874 369 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 PIK3CBP42338 1070 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 STT3AP46977 705 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 ALDH18A1P54886 795 aaKnown RBP16.25■□□□□ 0.19
COL7A1-206ENST00000466591 RPS13P62277 151 aaKnown RBP16.25■□□□□ 0.19
COL7A1-206ENST00000466591 TNFRSF17Q02223 184 aa16.25■□□□□ 0.19
COL7A1-206ENST00000466591 ASPHQ12797 758 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms