RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 NSMCE2Q96MF7 247 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 SPATA13Q96N96 652 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZNF577Q9BSK1 485 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 XPO4Q9C0E2 1151 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ATG10Q9H0Y0 220 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 HSD3B7Q9H2F3 369 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 DCLRE1BQ9H816 532 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 TEX10Q9NXF1 929 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 RNF215Q9Y6U7 377 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 RAD54L2Q9Y4B4 1467 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 GLTPD2A6NH11 291 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ARHGEF9O43307 516 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 NXPH4O95158 308 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR6A2O95222 327 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 HIST1H2AGP0C0S8 130 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 TPBGLP0DKB5 382 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 GPX3P22352 226 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 MARCKSP29966 332 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 FCGR2BP31994 310 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 FCGR2CP31995 323 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 TNFRSF4P43489 277 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ATXN3P54252 364 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ABCE1P61221 599 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 RBBP4Q09028 425 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 FASTKD3Q14CZ7 662 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 TRADDQ15628 312 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 MOGAT2Q3SYC2 334 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 PRAMEF7Q5VXH5 474 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 FAAP20Q6NZ36 180 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZNF329Q86UD4 541 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZFAND4Q86XD8 727 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 TBC1D10CQ8IV04 446 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ELMOD2Q8IZ81 293 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 METTL4Q8N3J2 472 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 GVQW1Q8N7I0 195 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 CNNM3Q8NE01 707 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR52E1Q8NGJ3 308 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR6F1Q8NGZ6 308 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 SPPL2AQ8TCT8 520 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 HIST1H2ACQ93077 130 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 RAB39BQ96DA2 213 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 RUNDC3BQ96NL0 473 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 AGAP4Q96P64 663 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ALKBH3Q96Q83 286 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 FTHL17Q9BXU8 183 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 FGFBP2Q9BYJ0 223 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 WWP1Q9H0M0 922 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 ABCG4Q9H172 646 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 NINJ2Q9NZG7 142 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 FAM153AQ9UHL3 310 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 NARFQ9UHQ1 456 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 BAIAP2L1Q9UHR4 511 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 MRTO4Q9UKD2 239 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 PIN4Q9Y237 131 aaKnown RBP3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 UBE4BO95155 1302 aa3.69□□□□□ -1.82
CDC42BPA-211ENST00000466538 IGHV3-20A0A0C4DH32 117 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 KRT87PA6NCN2 255 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 ANHXE9PGG2 379 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 GRID2O43424 1007 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 KRT86O43790 486 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 SOCS5O75159 536 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 TRIM49P0CI25 452 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 TRIM49CP0CI26 452 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 PCP11498 1178 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 ETS1P14921 441 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 AOC1P19801 751 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 SFNP31947 248 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 ASMTP46597 345 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 ATP12AP54707 1039 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 GEMP55040 296 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 BPIFB3P59826 476 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 KRT81Q14533 505 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 EPC2Q52LR7 807 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 FASTKD1Q53R41 847 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 DDI2Q5TDH0 399 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 RTL6Q6ICC9 239 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 RBM43Q6ZSC3 357 aaKnown RBP3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 Q6ZTC4 211 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 LRRTM1Q86UE6 522 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 KDM8Q8N371 416 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 LIPHQ8WWY8 451 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 C11orf52Q96A22 123 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 ESAMQ96AP7 390 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 C14orf79Q96F83 325 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 CNRIP1Q96F85 164 aaPredicted RBP3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 POM121L2Q96KW2 1035 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 LINC00479Q96M42 142 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 FAM111AQ96PZ2 611 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 RAB40CQ96S21 281 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 LGMNQ99538 433 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 COQ7Q99807 217 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 FUNDC2Q9BWH2 189 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 PARLQ9H300 379 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 KCNK13Q9HB14 408 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 NMUR1Q9HB89 426 aa3.68□□□□□ -1.82
CDC42BPA-211ENST00000466538 SCRT2Q9NQ03 307 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms