RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 METTL25Q8N6Q8 603 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 SMYD1Q8NB12 490 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 OR8K5Q8NH50 307 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 MAGEE2Q8TD90 523 aaPredicted RBP9.54□□□□□ -0.88
PMF1-204ENST00000466489 ZNF480Q8WV37 535 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 SLC13A3Q8WWT9 602 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 ZNF566Q969W8 418 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 TCTN2Q96GX1 697 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 IL17FQ96PD4 163 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 MAP3K3Q99759 626 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 SLC29A1Q99808 456 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 THUMPD3Q9BV44 507 aaKnown RBP9.54□□□□□ -0.88
PMF1-204ENST00000466489 DPY30Q9C005 99 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 B3GNT4Q9C0J1 378 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 RPF2Q9H7B2 306 aaKnown RBP9.54□□□□□ -0.88
PMF1-204ENST00000466489 MRPS30Q9NP92 439 aaKnown RBP9.54□□□□□ -0.88
PMF1-204ENST00000466489 SLC52A3Q9NQ40 469 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 SLC39A1Q9NY26 324 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 STOX2Q9P2F5 926 aaPredicted RBP9.54□□□□□ -0.88
PMF1-204ENST00000466489 PISDQ9UG56 409 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 SH3GLB1Q9Y371 365 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 OARD1Q9Y530 152 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 A3GALT2U3KPV4 340 aa9.54□□□□□ -0.88
PMF1-204ENST00000466489 NCOR2Q9Y618 2525 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TRABD2BA6NFA1 517 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 SAGE2PA6NJ88 616 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 FXYD1O00168 92 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 CDC7O00311 574 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 E2F3O00716 465 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 SOCS2O14508 198 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 POLR1CO15160 346 aaPredicted RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 TNFSF15O95150 251 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 IFNA14P01570 189 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 ALPLP05186 524 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 HNRNPCP07910 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
PMF1-204ENST00000466489 SPINK2P20155 84 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 CAPN3P20807 821 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 PRPS1L1P21108 318 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 ATP6V1B2P21281 511 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 PRPH2P23942 346 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 CD82P27701 267 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 MSX2P35548 267 aaPredicted RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 RPL3P39023 403 aaKnown RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 RANBP1P43487 201 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 CDH13P55290 713 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 PPP1CAP62136 330 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TBPL1P62380 186 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 OLR1P78380 273 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TEKQ02763 1124 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TAP2Q03519 686 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 RIPPLY1Q0D2K3 151 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 ABHD18Q0P651 414 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 GTF2H2Q13888 395 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 GRB7Q14451 532 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 IL11RAQ14626 422 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 RTP5Q14D33 572 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TSNQ15631 228 aaKnown RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 PHKG1Q16816 387 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 RGS21Q2M5E4 152 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 AP5B1Q2VPB7 878 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 CCSMST1Q4G0I0 132 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 GGTA1PQ4G0N0 100 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 PRAMEF13Q5VWM6 474 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 GTF2H2CQ6P1K8 395 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 IGF2-ASQ6U949 168 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 SBSNQ6UWP8 590 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TMEM207Q6UWW9 146 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 RETREG3Q86VR2 466 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TSPYL5Q86VY4 417 aaPredicted RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 C17orf64Q86WR6 236 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 RASGRP3Q8IV61 690 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 RIMKLAQ8IXN7 391 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 GPR135Q8IZ08 494 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 ZCCHC7Q8N3Z6 543 aaKnown RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 C2orf73Q8N5S3 287 aaPredicted RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 NATD1Q8N6N6 113 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 EFCAB3Q8N7B9 438 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 C19orf47Q8N9M1 422 aaKnown RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 LMNTD1Q8N9Z9 388 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 LINC01555Q8NAE3 123 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 OR5K1Q8NHB7 308 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 DNAJB14Q8TBM8 379 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 KLHL6Q8WZ60 621 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 EXT2Q93063 718 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 FBXL8Q96CD0 374 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 REXO5Q96IC2 774 aaKnown RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 SLC41A2Q96JW4 573 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 ZNF578Q96N58 590 aaPredicted RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 OR2A14Q96R47 310 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 TAAR9Q96RI9 348 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 ZNF347Q96SE7 839 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 MENTQ9BUN1 341 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 DDA1Q9BW61 102 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 NPLQ9BXD5 320 aaPredicted RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 CHRNA10Q9GZZ6 450 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 RAD21L1Q9H4I0 556 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 SEMA4BQ9NPR2 832 aaPredicted RBP9.53□□□□□ -0.88
PMF1-204ENST00000466489 FBXO8Q9NRD0 319 aa9.53□□□□□ -0.88
PMF1-204ENST00000466489 ATAD3AQ9NVI7 634 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms