RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 GPR83Q9NYM4 423 aa8.92□□□□□ -0.98
ATG3-203ENST00000465980 G3BP2Q9UN86 482 aaKnown RBP8.92□□□□□ -0.98
ATG3-203ENST00000465980 ZNF451Q9Y4E5 1061 aa8.92□□□□□ -0.98
ATG3-203ENST00000465980 PCDHGA9Q9Y5G4 932 aaKnown RBP8.92□□□□□ -0.98
ATG3-203ENST00000465980 PCNX1Q96RV3 2341 aa8.92□□□□□ -0.98
ATG3-203ENST00000465980 NBPF19A0A087WUL8 3843 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 KRTAP4-8A0A0G2JLE6 195 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 GOLGA8QA0A0J9YX86 632 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 GOLGA8OA6NCC3 632 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 CCT8L1PA6NM43 557 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 GOLGA8NF8WBI6 632 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 H0YIV9 168 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 MANBAO00462 879 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 PEX12O00623 359 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 PRICKLE3O43900 615 aaPredicted RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 CCDC22O60826 627 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 CTSVO60911 334 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 ALOX12BO75342 701 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 VPS4BO75351 444 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 CEACAM4O75871 244 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 KRT6AP02538 564 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 KRT6BP04259 564 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 SERPINA6P08185 405 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 C1GALT1C1LP0DN25 315 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 CD22P20273 847 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 ITGAXP20702 1163 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 EPHA3P29320 983 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 KRT6CP48668 564 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 VSX2P58304 361 aaPredicted RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 ZNF33BQ06732 778 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 LAPTM5Q13571 262 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 CPSF6Q16630 551 aaKnown RBP eCLIP8.91□□□□□ -0.98
ATG3-203ENST00000465980 ZSCAN26Q16670 478 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 LSM12Q3MHD2 195 aaKnown RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 XKR7Q5GH72 579 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 TCHHL1Q5QJ38 904 aaPredicted RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 FAM219BQ5XKK7 198 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 FAM91A1Q658Y4 838 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 NXPE4Q6UWF7 544 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 SHISA6Q6ZSJ9 500 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 MED25Q71SY5 747 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 TRPM8Q7Z2W7 1104 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 MTDHQ86UE4 582 aaKnown RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 MYLK4Q86YV6 388 aaPredicted RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 DDIASQ8IXT1 998 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 FITM2Q8N6M3 262 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 TMEM102Q8N9M5 508 aaPredicted RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 CLEC1AQ8NC01 280 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 OR2A1Q8NGT9 310 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 OR2Y1Q8NGV0 311 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 NEIL2Q969S2 332 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 SLC22A18Q96BI1 424 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 PTCD3Q96EY7 689 aaKnown RBP8.91□□□□□ -0.98
ATG3-203ENST00000465980 PPP1R36Q96LQ0 422 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 C3orf30Q96M34 536 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 LRRC37BQ96QE4 947 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 EFCAB11Q9BUY7 163 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 CHRNA10Q9GZZ6 450 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 MYLK2Q9H1R3 596 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 PELI2Q9HAT8 420 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 SLC22A11Q9NSA0 550 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 ABCF3Q9NUQ8 709 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 P4HTMQ9NXG6 502 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 ANKMY1Q9P2S6 941 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 TAC3Q9UHF0 121 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 SNX6Q9UNH7 406 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 SH2B3Q9UQQ2 575 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 HIF3AQ9Y2N7 669 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
ATG3-203ENST00000465980 A0A0J9YVX5 310 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 A0A1B0GX78 115 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 SLC28A1O00337 649 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 FCHO1O14526 889 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 FFAR3O14843 346 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 GPR42O15529 346 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 DPM1O60762 260 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 ULK1O75385 1050 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 EIF2S1P05198 315 aaKnown RBP8.9□□□□□ -0.98
ATG3-203ENST00000465980 UMODP07911 640 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 LINC00032P0C843 101 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 EPHA1P21709 976 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 GNLYP22749 145 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 OR1D4P47884 311 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 HTR6P50406 440 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 YBX1P67809 324 aaKnown RBP8.9□□□□□ -0.98
ATG3-203ENST00000465980 ABATP80404 500 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 PRDX1Q06830 199 aaKnown RBP8.9□□□□□ -0.98
ATG3-203ENST00000465980 SRSF1Q07955 248 aaKnown RBP eCLIP8.9□□□□□ -0.98
ATG3-203ENST00000465980 IFT88Q13099 833 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 ABRAXAS2Q15018 415 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 ZRSR2Q15696 482 aaKnown RBP8.9□□□□□ -0.98
ATG3-203ENST00000465980 ZC3H12BQ5HYM0 836 aaKnown RBP8.9□□□□□ -0.98
ATG3-203ENST00000465980 PAGE2BQ5JRK9 111 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 SPDYAQ5MJ70 313 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 CATSPEREQ5SY80 951 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 C10orf62Q5T681 223 aaPredicted RBP8.9□□□□□ -0.98
ATG3-203ENST00000465980 ICE2Q659A1 982 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 SLC6A19Q695T7 634 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 ANKRD34AQ69YU3 496 aa8.9□□□□□ -0.98
ATG3-203ENST00000465980 NXNQ6DKJ4 435 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms