RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 LPAR4Q99677 370 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 LHPPQ9H008 270 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 ZNF552Q9H707 407 aaPredicted RBP11.61□□□□□ -0.55
CHPF2-202ENST00000465601 RPF2Q9H7B2 306 aaKnown RBP11.61□□□□□ -0.55
CHPF2-202ENST00000465601 EML4Q9HC35 981 aaKnown RBP11.61□□□□□ -0.55
CHPF2-202ENST00000465601 PNO1Q9NRX1 252 aaKnown RBP11.61□□□□□ -0.55
CHPF2-202ENST00000465601 LYARQ9NX58 379 aaKnown RBP11.61□□□□□ -0.55
CHPF2-202ENST00000465601 MS4A12Q9NXJ0 267 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 PHF11Q9UIL8 331 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 ADAM29Q9UKF5 820 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 G3BP2Q9UN86 482 aaKnown RBP11.61□□□□□ -0.55
CHPF2-202ENST00000465601 PCDHGA9Q9Y5G4 932 aaKnown RBP11.61□□□□□ -0.55
CHPF2-202ENST00000465601 CLDN16Q9Y5I7 305 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 SVILO95425 2214 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 ZNF462Q96JM2 2506 aa11.61□□□□□ -0.55
CHPF2-202ENST00000465601 ARHGAP10A1A4S6 786 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 SERTM1A2A2V5 107 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 GLOD5A6NK44 160 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 TMEM233B4DJY2 109 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 ITM2AO43736 263 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 LYPLA1O75608 230 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-202ENST00000465601 SERPINA7P05543 415 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 FGF4P08620 206 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 PRR35P0CG20 571 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 NEFHP12036 1026 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 BGNP21810 368 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 PGDP52209 483 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 MAPK12P53778 367 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 TNFRSF17Q02223 184 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 STX4Q12846 297 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 NFATC3Q12968 1075 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 IMPG1Q17R60 797 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 BTBD16Q32M84 506 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 SPDYAQ5MJ70 313 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 IRAK1BP1Q5VVH5 260 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 ASB18Q6ZVZ8 466 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 TRIM46Q7Z4K8 759 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 CLYBLQ8N0X4 340 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 AGR3Q8TD06 166 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 ANKRD9Q96BM1 317 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-202ENST00000465601 ALOXE3Q9BYJ1 711 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 ZNF395Q9H8N7 513 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-202ENST00000465601 TEX10Q9NXF1 929 aaPredicted RBP11.6□□□□□ -0.55
CHPF2-202ENST00000465601 TRAF6Q9Y4K3 522 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 PTGDR2Q9Y5Y4 395 aa11.6□□□□□ -0.55
CHPF2-202ENST00000465601 NUP214P35658 2090 aaPredicted RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 FASNP49327 2511 aaKnown RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 BLACEA4D250 179 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 PGRMC2O15173 223 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 FGF17O60258 216 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 AIFM1O95831 613 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 IFNA16P05015 189 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 SERPINE1P05121 402 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 NR2F6P10588 404 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ITGAMP11215 1152 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ICAM2P13598 275 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 SERPINB5P36952 375 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 BUD31P41223 144 aaPredicted RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 SLC26A5P58743 744 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ABCE1P61221 599 aaKnown RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 RAE1P78406 368 aaKnown RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ACSM2AQ08AH3 577 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 UGT3A2Q3SY77 523 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 TTMPQ5BVD1 217 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 SH2D4BQ5SQS7 431 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 VWA5B1Q5TIE3 1220 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 KANK2Q63ZY3 851 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ACSM2BQ68CK6 577 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 PLAG1Q6DJT9 500 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 PTRH1Q86Y79 214 aaKnown RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 PSMF1Q92530 271 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 TANKQ92844 425 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 TM4SF18Q96CE8 201 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ATP6V1G3Q96LB4 118 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 SMAD5Q99717 465 aaKnown RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 TUBB1Q9H4B7 451 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 VIPAS39Q9H9C1 493 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 WDR41Q9HAD4 459 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ZBTB20Q9HC78 741 aaPredicted RBP11.59□□□□□ -0.55
CHPF2-202ENST00000465601 NKIRAS1Q9NYS0 192 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ZDHHC2Q9UIJ5 367 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 ZNF451Q9Y4E5 1061 aa11.59□□□□□ -0.55
CHPF2-202ENST00000465601 SAGE2PA6NJ88 616 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 TMEM114B3SHH9 223 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 SLC28A1O00337 649 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 PCDH7O60245 1069 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 SASH3O75995 380 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 MYO1DO94832 1006 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 HSPA4LO95757 839 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 CHEK2O96017 543 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 LINC00032P0C843 101 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 TNNI3P19429 210 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 SLC18A1P54219 525 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 FOLH1Q04609 750 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 STX3Q13277 289 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 SERTAD2Q14140 314 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 EXT1Q16394 746 aa11.58□□□□□ -0.56
CHPF2-202ENST00000465601 SPIN4Q56A73 249 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms