RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 TTMPQ5BVD1 217 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 SPDYAQ5MJ70 313 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 SH2D4BQ5SQS7 431 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 TCTN3Q6NUS6 607 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 FAM180BQ6P0A1 224 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 DGAT2L6Q6ZPD8 337 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 LSM14AQ8ND56 463 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 OR6Y1Q8NGX8 325 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 OR2T11Q8NH01 316 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 PPP1R14CQ8TAE6 165 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 ADAMTS18Q8TE60 1221 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 PSMF1Q92530 271 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 PPWD1Q96BP3 646 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 VPS50Q96JG6 964 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 LPAR4Q99677 370 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 SMAD5Q99717 465 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 TUBB6Q9BUF5 446 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 ALOXE3Q9BYJ1 711 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 C20orf27Q9GZN8 174 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 LHPPQ9H008 270 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 TUBB1Q9H4B7 451 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 RPF2Q9H7B2 306 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 ARGLU1Q9NWB6 273 aaPredicted RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 PLA2G3Q9NZ20 509 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 AHSPQ9NZD4 102 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 LUZP4Q9P127 313 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 C5AR2Q9P296 337 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 ZDHHC2Q9UIJ5 367 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 TUBD1Q9UJT1 453 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 MRPS33Q9Y291 106 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 MMACHCQ9Y4U1 282 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 PCDHGA9Q9Y5G4 932 aaKnown RBP10.92□□□□□ -0.66
CUX1-207ENST00000465461 CSAG2Q9Y5P2 127 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 SPACA6W5XKT8 324 aa10.92□□□□□ -0.66
CUX1-207ENST00000465461 ATRXP46100 2492 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 MAN1A2O60476 641 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 SASH3O75995 380 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 ZWINTO95229 277 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 SERPINA7P05543 415 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 CYC1P08574 325 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 LINC00032P0C843 101 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 SFTPCP11686 197 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 NEFHP12036 1026 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 HSD3B1P14060 373 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 TNNI3P19429 210 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 HSD3B2P26439 372 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 ARFIP1P53367 373 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 MAPK12P53778 367 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 SOX8P57073 446 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 SLC26A5P58743 744 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 NAA20P61599 178 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 FOLH1Q04609 750 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 STX4Q12846 297 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 IMPG1Q17R60 797 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 ZNF750Q32MQ0 723 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 C10orf62Q5T681 223 aaPredicted RBP10.91□□□□□ -0.66
CUX1-207ENST00000465461 HHATQ5VTY9 493 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 KANK2Q63ZY3 851 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 HDXQ7Z353 690 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 ZNF321PQ8N8H1 164 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 NFAM1Q8NET5 270 aaPredicted RBP10.91□□□□□ -0.66
CUX1-207ENST00000465461 TM4SF18Q96CE8 201 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 STMN4Q9H169 189 aaPredicted RBP10.91□□□□□ -0.66
CUX1-207ENST00000465461 KCNK13Q9HB14 408 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 LYARQ9NX58 379 aaKnown RBP10.91□□□□□ -0.66
CUX1-207ENST00000465461 GIMAP2Q9UG22 337 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 PHF11Q9UIL8 331 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 ADAM29Q9UKF5 820 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 TRAF6Q9Y4K3 522 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 CCL27Q9Y4X3 112 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 POLR3HQ9Y535 204 aaPredicted RBP10.91□□□□□ -0.66
CUX1-207ENST00000465461 DNAJC15Q9Y5T4 150 aa10.91□□□□□ -0.66
CUX1-207ENST00000465461 IGSF10Q6WRI0 2623 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 ATMQ13315 3056 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 SERTM1A2A2V5 107 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 SAGE2PA6NJ88 616 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 PCDH17O14917 1159 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 PCDH7O60245 1069 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 HSPA4LO95757 839 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 UQCRHP07919 91 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 NR2F6P10588 404 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 TLX1P31314 330 aaPredicted RBP10.9□□□□□ -0.66
CUX1-207ENST00000465461 PTGER1P34995 402 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 BUD31P41223 144 aaPredicted RBP10.9□□□□□ -0.66
CUX1-207ENST00000465461 UGT3A2Q3SY77 523 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 NDUFAF5Q5TEU4 345 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 VWA5B1Q5TIE3 1220 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 AGBL2Q5U5Z8 902 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 AGAP7PQ5VUJ5 663 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 IRAK1BP1Q5VVH5 260 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 PLAG1Q6DJT9 500 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 Q6ZSR9 355 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 PAGE2Q7Z2X7 111 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 TRIM46Q7Z4K8 759 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 DDIASQ8IXT1 998 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 CLYBLQ8N0X4 340 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 RBMXL3Q8N7X1 1067 aaKnown RBP10.9□□□□□ -0.66
CUX1-207ENST00000465461 GBP7Q8N8V2 638 aaPredicted RBP10.9□□□□□ -0.66
CUX1-207ENST00000465461 CATSPER1Q8NEC5 780 aa10.9□□□□□ -0.66
CUX1-207ENST00000465461 M1APQ8TC57 530 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms