RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 GLRA1P23415 457 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 MARCKSP29966 332 aaPredicted RBP3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 CASP9P55211 416 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 CCZ1BP86790 482 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 CCZ1P86791 482 aaPredicted RBP3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 MPPE1Q53F39 396 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 DDI2Q5TDH0 399 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 RAB12Q6IQ22 244 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 DLEU7Q6UYE1 221 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 OR4N5Q8IXE1 308 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 BATF2Q8N1L9 274 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 Q8NBF4 154 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 LEMD2Q8NC56 503 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 EXOC6Q8TAG9 804 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 C11orf45Q8TAV5 145 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 URGCPQ8TCY9 931 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 TCP11Q8WWU5 503 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 GTF3AQ92664 365 aaKnown RBP3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 SPAG8Q99932 426 aaPredicted RBP3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 SPXQ9BT56 116 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 ABCG4Q9H172 646 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 PARLQ9H300 379 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 KCNMB3Q9NPA1 279 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 TRIM10Q9UDY6 481 aa3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 MRPS2Q9Y399 296 aaKnown RBP3.08□□□□□ -1.92
HMGXB4-205ENST00000464480 IGHV4-30-2A0A087WSY4 118 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 IGHV3-38A0A0C4DH36 116 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 A0A0J9YWU9 116 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 OR5H15A6NDH6 313 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 ASB14A6NK59 587 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 SHISA7A6NL88 538 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 SRRM4A7MD48 611 aaKnown RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 H7C423 109 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 TLR4O00206 839 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 HTATSF1O43719 755 aaKnown RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 CXCL14O95715 111 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 CALCAP01258 141 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 CD1DP15813 335 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 PPP2R1AP30153 589 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 ZFP36L2P47974 494 aaKnown RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 HILS1P60008 231 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 HERV-K104P63124 156 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 MSLNQ13421 630 aaPredicted RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 NFATC2Q13469 925 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 TRADDQ15628 312 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 ECSCRQ19T08 205 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 TAF1BQ53T94 588 aaPredicted RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 NKAIN2Q5VXU1 208 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 RTL6Q6ICC9 239 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 MIER3Q7Z3K6 550 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 TBC1D10CQ8IV04 446 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 OR4L1Q8NH43 312 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 LRRC15Q8TF66 581 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 SLC13A3Q8WWT9 602 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 C11orf52Q96A22 123 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 MRPL24Q96A35 216 aaKnown RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 PCED1BQ96HM7 432 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 SLC45A3Q96JT2 553 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 RPGRIP1Q96KN7 1286 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 CXorf58Q96LI9 332 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 ALKBH3Q96Q83 286 aaPredicted RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 RAB40CQ96S21 281 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 STRADBQ9C0K7 418 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 CARD9Q9H257 536 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 SLC26A1Q9H2B4 701 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 TNMDQ9H2S6 317 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 CHMP4BQ9H444 224 aaKnown RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 SP140LQ9H930 580 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 PLEKHA3Q9HB20 300 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 SYTL2Q9HCH5 934 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 DDX28Q9NUL7 540 aaKnown RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 FETUBQ9UGM5 382 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 ASIC3Q9UHC3 531 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 STRAPQ9Y3F4 350 aaKnown RBP3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 RNF215Q9Y6U7 377 aa3.07□□□□□ -1.92
HMGXB4-205ENST00000464480 MACROD2A1Z1Q3 448 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ARHGAP42A6NI28 874 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 SOCS3O14543 225 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 CHEK1O14757 476 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ZNF749O43361 778 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 CSO75390 466 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 ANXA9O76027 345 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 OR6A2O95222 327 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 CCDC192P0DO97 292 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 AHCYP23526 432 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 FCARP24071 287 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 OXTRP30559 389 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 CAPGP40121 348 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 PITPNBP48739 271 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 CNN1P51911 297 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 HNRNPFP52597 415 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 PEX3P56589 373 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 SRP54P61011 504 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 SSTP61278 116 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 SRPXP78539 464 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 CDKL1Q00532 357 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 FKBP3Q00688 224 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 WASHC5Q12768 1159 aa3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 FASTKQ14296 549 aaKnown RBP3.06□□□□□ -1.92
HMGXB4-205ENST00000464480 KNOP1Q1ED39 458 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms